WormBase Tree Display for Gene: WBGene00240902

WBGene00240902 SMap: S_parent: Sequence: OVOC_OM2_11
  Identity: Version: 2
    Name: CGC_name: Ovo-let-653 From_analysis: Inferred_from_orthology
      Sequence_name: OVOC4093
      Molecular_name: OVOC4093
        OVOC4093.1
        OVP03003
      Public_name: Ovo-let-653
    Species: Onchocerca volvulus
    History: Version_change: 1 29 Nov 2013 15:05:33 WBPerson3111 Event: Imported: MAKER import
        2 24 Jan 2014 16:01:34 WBPerson4055 Name_change: CGC_name: Ovo-let-653
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: let
    RNASeq_FPKM: WBls:0000101 0.170931 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_median
        2.4049 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_mean
      WBls:0000104 0.105925 From_analysis: RNASeq.ovolvulus.WBls:0000104.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
        0.188562 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
        0.241093 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
        0.279157 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
        0.333516 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
        0.420406 From_analysis: RNASeq.ovolvulus.WBls:0000104.control_mean
        0.987273 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
        1.35319 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
        0 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
        2.81737 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
      WBls:0000107 0.273304 From_analysis: RNASeq.ovolvulus.WBls:0000107.control_mean
            RNASeq.ovolvulus.WBls:0000107.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 0.152314 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
        15.2983 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_mean
        39.0055 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
        6.73719 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
      WBls:0000664 0.1533 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
        0.216747 From_analysis: RNASeq.ovolvulus.WBls:0000664.control_mean
            RNASeq.ovolvulus.WBls:0000664.control_median
        0.280194 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
    Ortholog (34)
    Paralog: WBGene00237037 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00237351 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00238901 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00240900 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00242153 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00242579 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00242586 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00245661 Onchocerca volvulus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: PAN domain and PAN/Apple domain. Is an ortholog of C. elegans let-653. In C. elegans, let-653 is involved in several processes, including cuticle pattern formation; embryonic ectodermal digestive tract morphogenesis; and regulation of developmental process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: OVOC4093
    Corresponding_transcript: OVOC4093.1
    Other_sequence (14)
  Method: Gene