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WormBase Tree Display for Gene: WBGene00232788

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Name Class

WBGene00232788SMapS_parentSequenceBm_v4_ChrX_scaffold_001
IdentityVersion6
NameSequence_nameBm12527
Molecular_name (12)
Other_nameTAG12527Curator_confirmedWBPerson4055
TAG9577
Bm1_33425Person_evidenceWBPerson5841
Bma-vav-1.1From_analysisInferred_from_orthology
Public_nameBm12527
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:26WBPerson4055EventCreated
209 Oct 2015 09:28:23WBPerson4055EventAcquires_mergeWBGene00229838
301 Oct 2019 10:47:49WBPerson1983Name_changeCGC_nameBma-vav-1
427 Nov 2019 12:48:14WBPerson1983Name_changeCGC_nameBma-vav-1.1
Other_nameBma-vav-1
504 Feb 2020 15:43:56WBPerson1983Name_changeCGC_nameBma-vav-1
Other_nameBma-vav-1.1
604 Jun 2020 14:38:22WBPerson1983Name_changeCGC_nameRemoved
Acquires_mergeWBGene00229838
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000979.07762From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
0From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
2.97161From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
3.35618From_analysisRNASeq.brugia.WBls:0000097.control_median
3.67011From_analysisRNASeq.brugia.WBls:0000097.control_mean
3.74075From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
5.58406From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
9.72425From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
WBls:000007811.0943From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
11.1833From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
2.351From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
2.57951From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
6.30311From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
6.77934From_analysisRNASeq.brugia.WBls:0000078.control_mean
6.96363From_analysisRNASeq.brugia.WBls:0000078.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
6.9805From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
WBls:00000805.65026From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
8.31232From_analysisRNASeq.brugia.WBls:0000080.control_mean
8.73456From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
9.03059From_analysisRNASeq.brugia.WBls:0000080.control_median
9.32663From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
9.53783From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
WBls:0000081 (24)
WBls:000008210.3501From_analysisRNASeq.brugia.WBls:0000082.control_mean
10.5231From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
12.6874From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
9.24312From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
9.57054From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
9.72619From_analysisRNASeq.brugia.WBls:0000082.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
WBls:0000083 (82)
WBls:000009254.4635From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
55.3788From_analysisRNASeq.brugia.WBls:0000092.control_mean
RNASeq.brugia.WBls:0000092.control_median
56.2942From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:000009441.9926From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
42.923From_analysisRNASeq.brugia.WBls:0000094.control_mean
RNASeq.brugia.WBls:0000094.control_median
43.8534From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:000010121.7383From_analysisRNASeq.brugia.total_over_all_stages.control_mean
9.57054From_analysisRNASeq.brugia.total_over_all_stages.control_median
WBls:00006624.54903From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
6.77425From_analysisRNASeq.brugia.WBls:0000662.control_mean
RNASeq.brugia.WBls:0000662.control_median
8.99947From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:000066311.6488From_analysisRNASeq.brugia.WBls:0000663.control_mean
RNASeq.brugia.WBls:0000663.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
GO_annotation00249081
OrthologCSP21.g5888Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04235Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g10400Panagrellus redivivusFrom_analysisWormBase-Compara
WBGene00100026Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00239688Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00258975Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00222450Brugia malayiFrom_analysisWormBase-Compara
WBGene00222867Brugia malayiFrom_analysisWormBase-Compara
WBGene00224033Brugia malayiFrom_analysisWormBase-Compara
WBGene00224680Brugia malayiFrom_analysisWormBase-Compara
WBGene00224689Brugia malayiFrom_analysisWormBase-Compara
WBGene00229592Brugia malayiFrom_analysisWormBase-Compara
WBGene00230032Brugia malayiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable guanyl-nucleotide exchange factor activity. Is an ortholog of O. volvulus OVOC2879.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm12527a
Bm12527b
Bm12527c
Bm12527d
Corresponding_CDS_historyBm12527b:bm278
Corresponding_transcriptBm12527a.1
Bm12527b.1
Bm12527c.1
Bm12527d.1
Other_sequenceAA629462.1
OVC01457_1
ASC32103_1
GRC01906_1
GR12851
FE911315.1
FE913274.1
JI168521.1
MC05751
CD455900.1
Experimental_infoExpression_clusterWBPaper00051007:downregulated_F30_vs_L4
WBPaper00051007:downregulated_M30_vs_F30
WBPaper00051007:downregulated_M120_vs_F120
WBPaper00051007:upregulated_M42_vs_F42
WBPaper00051007:upregulated_M42_vs_M30
WBPaper00051007:upregulated_M120_vs_M30
WBPaper00051007:upregulated_M120_vs_M42
WBPaper00061765:Adult_vs_Micro_Downregulated
WBPaper00061765:L3_vs_Adult_Upregulated
WBPaper00061765:L4_vs_Adult_Upregulated
Remark[200603 pad] The CGC name Bma-vav-1 was deleted as there was no evidence to support it. This name has correctly been assigned to WBGene00222867Curator_confirmedWBPerson1983
MethodGene