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WormBase Tree Display for Gene: WBGene00226557

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Name Class

WBGene00226557SMapS_parentSequenceBm_v4_ChrX_scaffold_001
IdentityVersion6
NameCGC_nameBma-unc-3From_analysisInferred_from_orthology
Sequence_nameBm6296
Molecular_nameBm6296a
Bm6296a.1
BM45717
Bm6296b
BM46482
Bm6296b.1
Other_nameBm-unc-3
TAG6296Curator_confirmedWBPerson4055
Bm1_31015Person_evidenceWBPerson5841
Bm1_31010Person_evidenceWBPerson5841
Public_nameBma-unc-3
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:25WBPerson4055EventCreated
205 Jul 2013 11:43:21WBPerson4055Name_changeCGC_nameBma-unc-3
Other_nameBm-unc-3
308 Feb 2019 15:42:28WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:22WBPerson1983Name_changeCGC_nameBma-unc-3
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:27WBPerson1983Name_changeCGC_nameBma-unc-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000972.66152From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
0From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
2.09122From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
2.31637From_analysisRNASeq.brugia.WBls:0000097.control_mean
2.60384From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
2.76187From_analysisRNASeq.brugia.WBls:0000097.control_median
2.9199From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
3.06745From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
3.21581From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
WBls:000007812.1263From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
12.2405From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
17.8738From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
2.78636From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
3.12349From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
3.16249From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
4.02254From_analysisRNASeq.brugia.WBls:0000078.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
7.90507From_analysisRNASeq.brugia.WBls:0000078.control_mean
WBls:00000803.55015From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
4.28882From_analysisRNASeq.brugia.WBls:0000080.control_mean
4.32784From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
4.46332From_analysisRNASeq.brugia.WBls:0000080.control_median
4.59879From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
4.6785From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
WBls:0000081 (24)
WBls:00000820.575555From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
0.660732From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
2.1469From_analysisRNASeq.brugia.WBls:0000082.control_mean
2.90751From_analysisRNASeq.brugia.WBls:0000082.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
3.05442From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
3.53629From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
WBls:0000083 (81)
WBls:00000925.82911From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
6.36392From_analysisRNASeq.brugia.WBls:0000092.control_mean
RNASeq.brugia.WBls:0000092.control_median
6.89874From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:000009418.3982From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
21.1799From_analysisRNASeq.brugia.WBls:0000094.control_mean
RNASeq.brugia.WBls:0000094.control_median
23.9616From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:00001013.55015From_analysisRNASeq.brugia.total_over_all_stages.control_median
6.15298From_analysisRNASeq.brugia.total_over_all_stages.control_mean
WBls:000066216.8551From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
18.2143From_analysisRNASeq.brugia.WBls:0000662.control_mean
RNASeq.brugia.WBls:0000662.control_median
19.5736From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:000066339.1304From_analysisRNASeq.brugia.WBls:0000663.control_mean
RNASeq.brugia.WBls:0000663.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
GO_annotation00244873
00244874
Contained_in_operonBMOP2628
OrthologWBGene00151995Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00029583Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CBOVI.g2839Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g15800Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g16856Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP29.g23179Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25081Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9744Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g18768Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g16929Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g29647Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8761Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00272.g8258Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g10038Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00144.g5548Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01698Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_025639Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07560Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g2071Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0141800Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00006743Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00058555Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00110071Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00119650Caenorhabditis japonicaFrom_analysisWormBase-Compara
chrX_pilon.g20643Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00240610Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00265590Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00291761Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans unc-3. In C. elegans, unc-3 is involved in several processes, including dauer larval development; neuron differentiation; and positive regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm6296a
Bm6296b
Corresponding_CDS_historyBm6296:bm266
Corresponding_transcriptBm6296a.1
Bm6296b.1
Other_sequence (16)
Experimental_infoExpression_clusterWBPaper00051007:downregulated_F120_vs_F30
WBPaper00051007:downregulated_F120_vs_F42
WBPaper00051007:downregulated_M120_vs_F120
WBPaper00051007:downregulated_M120_vs_M30
WBPaper00061765:Adult_vs_Micro_Upregulated
WBPaper00061765:L3_vs_Adult_Upregulated
WBPaper00061765:L4_vs_Adult_Upregulated
WBPaper00061765:L4_vs_Micro_Upregulated
Remark[190208 pad] The CGC name Bma-unc-3 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Bma-unc-3 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene