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WormBase Tree Display for Gene: WBGene00225754

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Name Class

WBGene00225754SMapS_parentSequenceBm_v4_ChrX_scaffold_001
IdentityVersion6
NameSequence_nameBm5493
Molecular_nameBm5493a
Bm5493a.1
BM45557
Bm5493b
BM45538
Bm5493c
BM49266
Bm5493b.1
Bm5493c.1
Other_name (12)
Public_nameBm5493
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:25WBPerson4055EventCreated
219 Apr 2016 12:56:52WBPerson2970Name_changeCGC_nameBma-unc-2
319 Apr 2016 17:09:35WBPerson4055EventAcquires_mergeWBGene00228109
408 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
508 May 2019 10:09:26WBPerson1983Name_changeCGC_nameBma-unc-2
628 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
Acquires_mergeWBGene00228109
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000978.5126From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
0.662065From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
0.868742From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
1.09722From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
2.29883From_analysisRNASeq.brugia.WBls:0000097.control_median
3.3904From_analysisRNASeq.brugia.WBls:0000097.control_mean
3.50044From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
4.52596From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
9.688From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
WBls:000007810.0763From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
10.3342From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
6.2828From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
6.67718From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
6.86126From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
7.37623From_analysisRNASeq.brugia.WBls:0000078.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
7.9616From_analysisRNASeq.brugia.WBls:0000078.control_mean
8.12321From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
WBls:00000800.473638From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
1.19246From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
1.32153From_analysisRNASeq.brugia.WBls:0000080.control_median
1.33923From_analysisRNASeq.brugia.WBls:0000080.control_mean
1.45061From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
2.24023From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
WBls:0000081 (24)
WBls:000008210.0378From_analysisRNASeq.brugia.WBls:0000082.control_mean
13.1864From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
9.11299From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
9.14902From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
9.20774From_analysisRNASeq.brugia.WBls:0000082.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
9.53297From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
WBls:0000083 (81)
WBls:00000921.89593From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
1.96521From_analysisRNASeq.brugia.WBls:0000092.control_mean
RNASeq.brugia.WBls:0000092.control_median
2.03449From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:00000942.96873From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
3.19834From_analysisRNASeq.brugia.WBls:0000094.control_mean
RNASeq.brugia.WBls:0000094.control_median
3.42795From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
WBls:00001016.2828From_analysisRNASeq.brugia.total_over_all_stages.control_median
6.49677From_analysisRNASeq.brugia.total_over_all_stages.control_mean
WBls:00006626.14409From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
7.06592From_analysisRNASeq.brugia.WBls:0000662.control_mean
RNASeq.brugia.WBls:0000662.control_median
7.98775From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:00006633.35252From_analysisRNASeq.brugia.WBls:0000663.control_mean
RNASeq.brugia.WBls:0000663.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
GO_annotation00243734
00243735
00243736
00243737
00243738
00243739
00243740
00243741
00243742
Contained_in_operonBMOP2651
OrthologWBGene00190957Caenorhabditis brenneriFrom_analysisWormBase-Compara
Cang_2012_03_13_00571.g12365Caenorhabditis angariaFrom_analysisWormBase-Compara
Csp11.Scaffold582.g4656Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Pan_g22163Panagrellus redivivusFrom_analysisWormBase-Compara
WBGene00208334Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00240556Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00259157Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286543Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00222695Brugia malayiFrom_analysisWormBase-Compara
WBGene00223086Brugia malayiFrom_analysisWormBase-Compara
WBGene00223190Brugia malayiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable voltage-gated calcium channel activity. Predicted to be involved in calcium ion transmembrane transport. Predicted to be located in plasma membrane. Predicted to be part of voltage-gated calcium channel complex. Is an ortholog of O. volvulus Ovo-unc-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm5493a
Bm5493b
Bm5493c
Corresponding_CDS_historyBm5493a:bm252
Bm5493b:bm252
Corresponding_transcriptBm5493a.1
Bm5493b.1
Bm5493c.1
Other_sequence (77)
Experimental_infoExpression_clusterWBPaper00045439:BM_Cluster_P7
WBPaper00045439:BM_Cluster_P11
WBPaper00051007:downregulated_M30_vs_F30
WBPaper00051007:downregulated_M30_vs_L4
WBPaper00051007:upregulated_F120_vs_F30
WBPaper00051007:upregulated_M120_vs_M30
WBPaper00061765:Adult_vs_Micro_Upregulated
WBPaper00061765:L3_vs_Adult_Downregulated
WBPaper00061765:L4_vs_Adult_Downregulated
WBPaper00061765:L4_vs_Micro_Downregulated
ReferenceWBPaper00045439
Remark[190208 pad] The CGC name Bma-unc-2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Bma-unc-2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene