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WormBase Tree Display for Gene: WBGene00220165

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Name Class

WBGene00220165SMapS_parentSequenceY47G6A
IdentityVersion1
NameSequence_nameY47G6A.36
Molecular_nameY47G6A.36
Other_nameCELE_Y47G6A.36Accession_evidenceNDBBX284601
Public_nameY47G6A.36
DB_infoDatabaseNDBlocus_tagCELE_Y47G6A.36
NCBIgene24105113
RefSeqproteinNR_101539.1
RNAcentralURSidURS00002AFBB9
SpeciesCaenorhabditis elegans
HistoryVersion_change113 Aug 2012 10:27:15WBPerson1983EventCreated
StatusLive
Gene_infoBiotypeSO:0001263
AlleleWBVar01342597
WBVar00310701
WBVar00626524
WBVar00626525
WBVar01499786
WBVar01499985
WBVar00330553
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionEnriched in germ line and head mesodermal cell based on RNA-seq studies. Is affected by several genes including rrf-3; cep-1; and sma-2 based on RNA-seq and microarray studies. Is affected by seven chemicals including Tunicamycin; paraquat; and Chlorpyrifos based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptY47G6A.36
Experimental_infoRNAi_result (18)
Microarray_resultsSMD_Y47G6A_247.G
186980_at
A_12_P105516
GPL21109_Y47G6A.36
GPL3518_CE24359
GPL9450_Y47G6A.15
cea2.i.06026
Expression_cluster (66)
Map_infoPositivePositive_cloneY47G6AInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI-3.22067
Remark[120808 pad] Created as part of an ncRNA dataset from Xiao et al. 2011Paper_evidenceWBPaper00040814
MethodGene