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WormBase Tree Display for Gene: WBGene00219681

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Name Class

WBGene00219681SMapS_parentSequenceF25B4
IdentityVersion1
NameCGC_nameanr-6Person_evidenceWBPerson6396
Sequence_nameF25B4.17
Molecular_nameF25B4.17
Other_nameCELE_F25B4.17Accession_evidenceNDBBX284605
Public_nameanr-6
DB_infoDatabaseNDBlocus_tagCELE_F25B4.17
NCBIgene24104477
RefSeqproteinNR_102023.1
RNAcentralURSidURS0000544202
SpeciesCaenorhabditis elegans
HistoryVersion_change113 Aug 2012 10:25:35WBPerson1983EventCreated
StatusLive
Gene_infoBiotypeSO:0002182
Gene_classanr
AlleleWBVar01499528
WBVar01499740
WBVar01013678
WBVar01500129
WBVar00458914
WBVar00458915
WBVar01588310
WBVar01499496
WBVar01499316
WBVar01500066
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionEnriched in AVK based on RNA-seq studies. Is affected by cep-1 and etr-1 based on RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptF25B4.17
Other_sequenceCRC01756_1
Experimental_infoRNAi_resultWBRNAi00045467Inferred_automaticallyRNAi_primary
WBRNAi00062214Inferred_automaticallyRNAi_primary
WBRNAi00013847Inferred_automaticallyRNAi_primary
WBRNAi00031350Inferred_automaticallyRNAi_primary
Expression_clusterWBPaper00045380:cep-1(gk138)_downregulated_normal
WBPaper00045380:cep-1(gk138)_upregulated_UV
WBPaper00045521:Gender_Neutral
WBPaper00055565:AVK_enriched
WBPaper00056868:P.aeruginosa_downregulated_smallRNA
WBPaper00062325:muscle_enriched_noncoding-RNA
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
Map_infoMapVPosition-1.24198
PositivePositive_cloneF25B4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Remark[120803 pad] Created as part of a lincRNA and anti-sense RNA data submission from Nam JW, et al 2012.Paper_evidenceWBPaper00041194
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene