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WormBase Tree Display for Gene: WBGene00219627

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Name Class

WBGene00219627SMapS_parentSequenceY73F8A
IdentityVersion1
NameCGC_nameanr-3Person_evidenceWBPerson6396
Sequence_nameY73F8A.1174
Molecular_nameY73F8A.1174
Other_nameCELE_Y73F8A.1174Accession_evidenceNDBBX284604
Public_nameanr-3
DB_infoDatabaseNDBlocus_tagCELE_Y73F8A.1174
NCBIgene24105229
RefSeqproteinNR_101984.1
RNAcentralURSidURS0000178802
SpeciesCaenorhabditis elegans
HistoryVersion_change113 Aug 2012 10:25:36WBPerson1983EventCreated
StatusLive
Gene_infoBiotypeSO:0002182
Gene_classanr
Allele (63)
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionEnriched in neurons based on RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptY73F8A.1174
Experimental_infoRNAi_resultWBRNAi00037824Inferred_automaticallyRNAi_primary
WBRNAi00058401Inferred_automaticallyRNAi_primary
Expression_clusterWBPaper00045521:Oogenic
WBPaper00056868:P.aeruginosa_downregulated_smallRNA
WBPaper00059754:P.aeruginosa_PA14_upregulated
WBPaper00062103:neuron_enriched
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
Map_infoMapIVPosition14.1825
PositivePositive_cloneY73F8AInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Remark[120803 pad] Created as part of a lincRNA and anti-sense RNA data submission from Nam JW, et al 2012.Paper_evidenceWBPaper00041194
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene