WormBase Tree Display for Gene: WBGene00219235
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| WBGene00219235 | SMap | S_parent | Sequence | K03B4 | ||||
|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | ||||||
| Name | Sequence_name | K03B4.8 | ||||||
| Molecular_name | K03B4.8 | |||||||
| K03B4.8.1 | ||||||||
| CE46634 | ||||||||
| Other_name | CELE_K03B4.8 | Accession_evidence | NDB | BX284605 | ||||
| Public_name | K03B4.8 | |||||||
| DB_info | Database | WormFlux | gene | WBGene00219235 | ||||
| NDB | locus_tag | CELE_K03B4.8 | ||||||
| Panther | gene | CAEEL|WormBase=WBGene00219235|UniProtKB=H2L022 | ||||||
| family | PTHR31897 | |||||||
| NCBI | gene | 13212644 | ||||||
| RefSeq | protein | NM_001269116.3 | ||||||
| TREEFAM | TREEFAM_ID | TF315866 | ||||||
| TrEMBL | UniProtAcc | H2L022 | ||||||
| UniProt_GCRP | UniProtAcc | H2L022 | ||||||
| Species | Caenorhabditis elegans | |||||||
| History | Version_change | 1 | 19 Sep 2011 11:26:32 | WBPerson1849 | Event | Created | ||
| Status | Live | |||||||
| Gene_info | Biotype | SO:0001217 | ||||||
| Allele (17) | ||||||||
| RNASeq_FPKM (74) | ||||||||
| Ortholog (46) | ||||||||
| Paralog (27) | ||||||||
| Structured_description | Automated_description | Enriched in amphid sheath cell based on RNA-seq studies. Is affected by several genes including nhr-49; unc-70; and cnd-1 based on RNA-seq studies. Is affected by multi-walled carbon nanotube and silicon dioxide nanoparticle based on RNA-seq studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF19 and Domain of unknown function (DUF19). | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | |||||||
| WBPerson37462 | ||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
| Molecular_info | Corresponding_CDS | K03B4.8 | ||||||
| Corresponding_transcript | K03B4.8.1 | |||||||
| Experimental_info | RNAi_result | WBRNAi00049794 | Inferred_automatically | RNAi_primary | ||||
| Expr_pattern | Expr1153512 | |||||||
| Expr2004732 | ||||||||
| Expr2022955 | ||||||||
| Microarray_results | GPL14144_K03B4.6_833-892_0.905_17_A | |||||||
| GPL19516_CGZ0027553 | ||||||||
| GPL21109_K03B4.8 | ||||||||
| GPL8673_K03B4_6P00214 | ||||||||
| GPL8673_K03B4_6P00602 | ||||||||
| Expression_cluster | WBPaper00049377:MWCNT_downregulated | |||||||
| WBPaper00049489:AMsh-glia_enriched | ||||||||
| WBPaper00057041:spc-1(cas971)_downregulated | ||||||||
| WBPaper00057041:unc-70(cas983)_downregulated | ||||||||
| WBPaper00059426:SiO2-nanoparticles_downregulated | ||||||||
| WBPaper00059932:cnd-1(ju29)_downregulated | ||||||||
| WBPaper00060434:pH4.33_vs_pH6.33_downrgulated | ||||||||
| WBPaper00061424:Diet_MYb120_upregulated | ||||||||
| WBPaper00061530:nhr-49(e2144)_upregulated | ||||||||
| Map_info | Positive | Positive_clone | K03B4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Interpolated_map_position | V | -4.73069 | ||||||
| Method | Gene |
