WormBase Tree Display for Gene: WBGene00195248
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WBGene00195248 | SMap | S_parent | Sequence | B0334 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | emc-5 | Person_evidence | WBPerson61 | |||||
Sequence_name | B0334.15 | ||||||||
Molecular_name | B0334.15 | ||||||||
B0334.15.1 | |||||||||
CE45304 | |||||||||
B0334.15.2 | |||||||||
Other_name | CELE_B0334.15 | Accession_evidence | NDB | BX284602 | |||||
Public_name | emc-5 | ||||||||
DB_info | Database | WormFlux | gene | WBGene00195248 | |||||
NDB | locus_tag | CELE_B0334.15 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00195248|UniProtKB=E1B6R8 | |||||||
family | PTHR21181 | ||||||||
NCBI | gene | 13187162 | |||||||
RefSeq | protein | NM_001381609.2 | |||||||
TrEMBL | UniProtAcc | E1B6R8 | |||||||
UniProt_GCRP | UniProtAcc | E1B6R8 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 24 Aug 2010 17:04:41 | WBPerson1983 | Event | Split_from | WBGene00007415 | ||
2 | 11 Dec 2012 14:02:14 | WBPerson2970 | Name_change | CGC_name | emc-5 | ||||
Split_from | WBGene00007415 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | emc | ||||||||
Allele (29) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (21) | |||||||||
Contained_in_operon | CEOP5631 | ||||||||
Ortholog (17) | |||||||||
Paralog | WBGene00007145 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable inorganic cation transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in Golgi apparatus; early endosome; and plasma membrane. Predicted to be part of EMC complex. Is an ortholog of human MMGT1 (membrane magnesium transporter 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | B0334.15 | |||||||
Corresponding_transcript | B0334.15.1 | ||||||||
B0334.15.2 | |||||||||
Other_sequence (4) | |||||||||
Associated_feature | WBsf989781 | ||||||||
WBsf989782 | |||||||||
WBsf1013249 | |||||||||
WBsf1013250 | |||||||||
Experimental_info | RNAi_result | WBRNAi00038931 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00093604 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00009707 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00028090 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00001701 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00093617 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00093610 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1040490 | ||||||||
Expr1143110 | |||||||||
Expr2011308 | |||||||||
Expr2029544 | |||||||||
Microarray_results | SMD_B0334.4 | ||||||||
SMD_B0334.5 | |||||||||
SMD_B0334.5:2 | |||||||||
174046_s_at | |||||||||
GPL14144_B0334.5_818-877_0.902_19_C | |||||||||
GPL19516_CGZ0000762 | |||||||||
GPL21109_B0334.15 | |||||||||
GPL8673_B0334_5P00047 | |||||||||
GPL8673_B0334_5P00596 | |||||||||
Expression_cluster (74) | |||||||||
Interaction | WBInteraction000559020 | ||||||||
WBInteraction000565493 | |||||||||
WBInteraction000573961 | |||||||||
WBInteraction000574317 | |||||||||
WBInteraction000586359 | |||||||||
Map_info | Map | II | Position | 3.5226 | |||||
Positive | Positive_clone | B0334 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00055090 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |