WormBase Tree Display for Gene: WBGene00194852
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WBGene00194852 | SMap | S_parent | Sequence | T28A8 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele | WBVar01498619 | |||||
WBVar01499774 | ||||||
WBVar01498679 | ||||||
WBVar01499629 | ||||||
WBVar00876006 | ||||||
WBVar00876007 | ||||||
WBVar00876008 | ||||||
WBVar01794434 | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog | chrIII_pilon.g9374 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||
Paralog (35) | ||||||
Structured_description | Automated_description | Enriched in germ line and head mesodermal cell based on RNA-seq studies. Is affected by several genes including daf-2; skn-1; and pgl-1 based on RNA-seq and microarray studies. Is affected by nine chemicals including rotenone; manganese chloride; and metformin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SPK domain and Domain of unknown function (DUF545). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed (2) | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | T28A8.8a | ||||
Corresponding_CDS_history | T28A8.8:wp219 | |||||
Corresponding_transcript | T28A8.8b | |||||
T28A8.8a.1 | ||||||
Other_sequence | JI476460.1 | |||||
Experimental_info | RNAi_result | WBRNAi00082455 | Inferred_automatically | RNAi_primary | ||
WBRNAi00006240 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00054374 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00082650 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1157924 | |||||
Expr2006595 | ||||||
Expr2024812 | ||||||
Microarray_results (15) | ||||||
Expression_cluster (82) | ||||||
Map_info | Positive | Positive_clone | T28A8 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | III | 21.2481 | ||||
Method | Gene |