WormBase Tree Display for Gene: WBGene00190777

WBGene00190777 SMap: S_parent: Sequence: Cbre_Contig2021
  Identity: Version: 2
    Name: CGC_name: Cbn-hacl-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN28812
      Molecular_name: CBN28812
        CBN28812.1
        CN33512
      Public_name: Cbn-hacl-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 20 May 2009 11:55:52 WBPerson1847 Event: Created
        2 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Cbn-hacl-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hacl
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 11.6975 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        23.3951 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 103.61 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        47.662 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        49.1411 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        89.2366 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        98.49 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        34.2486 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        68.4972 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 60.0881 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
        64.4428 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
    GO_annotation: 00226445
      00226446
      00226447
    Ortholog (33)
    Paralog: WBGene00194039 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00193957 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00147526 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00163699 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable catalytic activity; magnesium ion binding activity; and thiamine pyrophosphate binding activity. Is an ortholog of C. elegans hacl-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN28812
    Corresponding_transcript: CBN28812.1
    Other_sequence (21)
  Experimental_info: Microarray_results: GPL14142_CBN28812_1158-1217_0.945_3_C
      GPL14142_CBN28812_1283-1342_0.923_11_B
      GPL14142_CBN28812_1335-1394_0.960_1_A
      GPL14142_CBN32074_980-1039_0.930_11_B
      GPL14142_CBN32074_988-1047_0.928_13_C
      GPL14142_CBN32074_1034-1093_0.933_7_A
  Method: Gene