WormBase Tree Display for Gene: WBGene00185001
expand all nodes | collapse all nodes | view schema
WBGene00185001 | SMap | S_parent | Sequence | F56A8 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (44) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (30) | ||||||
Structured_description | Automated_description | Enriched in several structures, including ABplpppapa; ABprpppapa; G2; pharyngeal cell; and rectal epithelial cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including skn-1; clk-1; and npr-1 based on RNA-seq and microarray studies. Is affected by six chemicals including rotenone; allantoin; and Sirolimus based on RNA-seq and microarray studies. Human ortholog(s) of this gene implicated in osteogenesis imperfecta. Is predicted to encode a protein with the following domains: ERK and JNK pathways, inhibitor and Coiled-coil domain-containing protein 134. Is an ortholog of human CCDC134 (coiled-coil domain containing 134). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:12347 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:26185) | |
Molecular_info | Corresponding_CDS | F56A8.9 | ||||
Corresponding_transcript | F56A8.9.1 | |||||
Other_sequence (17) | ||||||
Associated_feature | WBsf645694 | |||||
Experimental_info | Expr_pattern | Expr1022593 | ||||
Expr1040434 | ||||||
Expr1152394 | ||||||
Expr2004270 | ||||||
Expr2022492 | ||||||
Microarray_results (14) | ||||||
Expression_cluster (78) | ||||||
Map_info | Positive | Positive_clone | F56A8 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | III | 21.144 | ||||
Reference | WBPaper00055090 | |||||
Method | Gene |