WormBase Tree Display for Gene: WBGene00176985

WBGene00176985 SMap: S_parent: Sequence: Cjap.Contig17162
  Identity: Version: 3
    Name: CGC_name: Cjp-unc-38 From_analysis: Inferred_from_orthology
      Sequence_name: CJA21413
      Molecular_name: CJA21413
        CJA21413.1
        JA20216
      Public_name: Cjp-unc-38
    Species: Caenorhabditis japonica
    History: Version_change: 1 22 Jan 2009 15:16:35 WBPerson4055 Event: Imported: from WASHU
        2 27 Jan 2009 12:59:26 WBPerson4055 Name_change: CGC_name: Cjp-unc-38
        3 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 16.83 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 10.5863 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 6.10908 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        6.28075 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        6.45241 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 0.651312 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        1.00385 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        1.13032 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        1.30983 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        1.43842 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        1.46811 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        1.6264 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        1.70868 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        1.74417 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        2.33277 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
      WBls:0000101 1.70868 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        3.96039 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00223910
      00223911
      00223912
      00223913
      00223914
      00223915
      00223916
      00223917
    Ortholog (38)
    Paralog (118)
    Structured_description: Automated_description: Predicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans unc-38. In C. elegans, unc-38 is involved in several processes, including calcium ion import across plasma membrane; neuromuscular synaptic transmission; and regulation of multicellular organismal process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA21413
    Corresponding_transcript: CJA21413.1
    Other_sequence: EU053155.1
      Hbac_isotig02006
      Y13851.1
      JI170443.1
      GU060999.1
      L12543.1
      ALC00343_1
      HCC00126_1
      BMC00651_1
      TX00730
      ACC39336_1
      MA02546
      ACC16523_1
      EY458847.1
      Oden_isotig19387
      EU852579.1
      Dviv_isotig03405
      GU256648.1
      Dviv_isotig03402
      ASC19452_1
      EU006791.1
      AS08435
      Tcir_isotig29062
      MAC01827_1
      DN556919.1
      LSC00289_1
      Dviv_isotig03408
      HC05952
      BXC05782_1
      EY468796.1
      JI166094.1
      Oden_isotig19773
      L20465.1
      HC04481
      EX552711.1
      OVC02933
      BU585858.1
      Tcol_isotig22024
      JI166733.1
      Acan_isotig08054
      GU060984.1
      HCC00052_1
      TCC00112_1
      Dviv_isotig03406
      FG348572.1
      AI374023.1
      GU060992.1
      JO468998.1
      GU135625.1
      OOC02375_1
  Experimental_info: Expr_pattern: Expr1091905
    Microarray_results (3)
  Method: Gene