WormBase Tree Display for Gene: WBGene00174927

WBGene00174927 SMap: S_parent: Sequence: R144
  Identity: Version: 1
    Name: CGC_name: 21ur-15580
      Sequence_name: R144.14
      Molecular_name: R144.14
      Other_name: CELE_R144.14 Accession_evidence: NDB BX284603
      Public_name: 21ur-15580
    DB_info: Database: NDB locus_tag CELE_R144.14
        NCBI gene 13189434
        RefSeq protein NR_052301.1
        RNAcentral URSid URS0000196AB5
    Species: Caenorhabditis elegans
    History: Version_change: 1 06 Nov 2008 15:18:59 WBPerson1847 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001638
    Gene_class: 21ur
    Allele: WBVar01500247
      WBVar01500248
    RNASeq_FPKM (74)
  Molecular_info: Corresponding_transcript: R144.14
    Other_sequence: JI174878.1
  Experimental_info: Expression_cluster: WBPaper00045521:Gender_Neutral
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
  Map_info: Map: III Position: -2.2476
    Positive: Positive_clone: R144 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: This locus is tentatively annotated as a 21U-RNA gene. It has the upstream motif characteristic of a 21U-RNA locus and is associated with a sequenced 21-nt RNA. However, the 21-nt RNA was not sequenced many times and does not begin with a U, raising the possibility that this might be a false-positive annotation or that the 21-nt RNA might be generated by the 21U-RNA biogenesis machinery but be a poor binding substrates for the PRG-1 protein. Person_evidence: WBPerson6396
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene