WormBase Tree Display for Gene: WBGene00167250

WBGene00167250 SMap: S_parent: Sequence: Y73B6A
  Identity: Version: 1
    Name: CGC_name: 21ur-12572
      Sequence_name: Y73B6A.8
      Molecular_name: Y73B6A.8
      Other_name: CELE_Y73B6A.8 Accession_evidence: NDB BX284604
      Public_name: 21ur-12572
    DB_info: Database: NDB locus_tag CELE_Y73B6A.8
        NCBI gene 13196263
        RefSeq protein NR_055932.1
        RNAcentral URSid URS0000245043
    Species: Caenorhabditis elegans
    History: Version_change: 1 06 Nov 2008 15:18:34 WBPerson1847 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001638
    Gene_class: 21ur
    Allele: WBVar02075664
      WBVar01499395
      WBVar01499396
      WBVar01499633
      WBVar02151558
      WBVar01500245
    RNASeq_FPKM (74)
    Structured_description: Automated_description: Is affected by hmg-3; nfki-1; and jmjd-5 based on RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_transcript: Y73B6A.8
  Experimental_info: Expression_cluster: WBPaper00045521:Oogenic
      WBPaper00055013:hmg-3(bar24)_upregulated
      WBPaper00060445:nfki-1(cer1)_upregulated_L4
      WBPaper00062156:jmjd-5(zr1234)_updownregulated
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00065993:glp-1(e2141)_downregulated
  Map_info: Map: IV Position: 3.22287
    Positive: Positive_clone: Y73B6A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: This locus is tentatively annotated as a 21U-RNA gene. It has the upstream motif characteristic of a 21U-RNA locus and is associated with a sequenced 21-nt RNA. However, the 21-nt RNA was not sequenced many times and does not begin with a U, raising the possibility that this might be a false-positive annotation or that the 21-nt RNA might be generated by the 21U-RNA biogenesis machinery but be a poor binding substrates for the PRG-1 protein. Person_evidence: WBPerson6396
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene