WormBase Tree Display for Gene: WBGene00158886

WBGene00158886 SMap: S_parent: Sequence: Cbre_Contig300
  Identity: Version: 2
    Name: CGC_name: Cbn-rcor-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN20161
      Molecular_name: CBN20161
        CBN20161.1
        CN03057
      Public_name: Cbn-rcor-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:52 WBPerson4055 Event: Imported: from NGASP
        2 11 Sep 2012 11:17:02 WBPerson2970 Name_change: CGC_name: Cbn-rcor-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rcor
    RNASeq_FPKM: WBls:0000002 0.51306 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        0.625124 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        1.09427 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        1.44116 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        1.56342 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        2.03675 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        2.80008 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        3.14536 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        3.72783 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
      WBls:0000004 14.1648 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        28.3295 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        2.51696 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        2.5398 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        2.86553 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        3.57463 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        4.23443 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
      WBls:0000038 2.23191 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        2.40144 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        2.57097 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (16)
      WBls:0000101 2.57097 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        5.1941 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog (17)
    Paralog: WBGene00192350 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00143291 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00145651 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00146436 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00149522 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00150414 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00157341 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00159350 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00193045 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: SANT/Myb domain; Homeobox-like domain superfamily; and ELM2 domain. Is an ortholog of C. elegans rcor-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN20161
    Corresponding_transcript: CBN20161.1
    Other_sequence: CBC12632_1
  Experimental_info: Microarray_results: GPL14142_CBN20161_805-864_0.848_27_B
      GPL14142_CBN20161_1158-1217_0.502_244_A
      GPL14142_CBN20161_1505-1564_0.655_162_C
  Method: Gene