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WormBase Tree Display for Gene: WBGene00158228

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Name Class

WBGene00158228SMapS_parentSequenceCbre_Contig115
IdentityVersion1
NameCGC_nameCbn-unc-80From_analysisInferred_from_orthology
Sequence_nameCBN19503
Molecular_nameCBN19503
CBN19503.1
CN13461
Other_nameCBN19503
Public_nameCbn-unc-80
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-unc-80
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040.132501From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0.265002From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:000002417.2238From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
24.4756From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
33.1441From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
36.549From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
36.7721From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:00000383.88827From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
3.95978From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
4.03129From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (17)
WBls:00001011.3538From_analysisRNASeq.brenneri.total_over_all_stages.control_median
1.6294From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
OrthologWBGene00006812Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00027983Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00063566Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00122691Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g2227Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g16091Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g7029Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g7952Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g20590Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g7280Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g1186Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g2252Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9934Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g7116Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g20767Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1938Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_03452.g18097Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-80Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g21785Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02725.g27697Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_02725.g27698Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_02725.g27699Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03494.g30373Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_04303.g32591Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_07000.g37259Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_19881Caenorhabditis latensFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07312Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g5617Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50426200Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00107425Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00223829Brugia malayiFrom_analysisWormBase-Compara
chrV_pilon.g18189Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00244388Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244389Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00294580Trichuris murisFrom_analysisWormBase-Compara
WBGene00296023Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Cation channel complex component UNC80, N-terminal and UNC80 N-terminal. Is an ortholog of C. elegans unc-80. In C. elegans, unc-80 is involved in several processes, including monoatomic cation homeostasis; positive regulation of locomotion; and response to anesthetic.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN19503
Corresponding_transcriptCBN19503.1
Other_sequence (39)
Experimental_infoMicroarray_resultsGPL14142_CBN19503_8864-8923_0.901_16_C
GPL14142_CBN19503_8908-8967_0.904_12_A
GPL14142_CBN19503_9179-9238_0.961_1_B
MethodGene