WormBase Tree Display for Gene: WBGene00155169

WBGene00155169 SMap: S_parent: Sequence: Cbre_Contig89
  Identity: Version: 4
    Name: CGC_name: Cbn-kreg-1.3 From_analysis: Inferred_from_orthology
      Sequence_name: CBN16444
      Molecular_name: CBN16444
        CBN16444.1
        CN29600
      Public_name: Cbn-kreg-1.3
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:51 WBPerson4055 Event: Imported: from NGASP
        2 08 Feb 2019 15:42:27 WBPerson1983 Name_change: CGC_name: Cbn-kreg-1.1
        3 08 May 2019 10:09:28 WBPerson1983 Name_change: CGC_name: Removed
        4 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cbn-kreg-1.3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: kreg
    RNASeq_FPKM: WBls:0000002 1.86409 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
            RNASeq.brenneri.WBls:0000002.control_median
        4.98885 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
        5.71001 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        7.94206 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
            RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
            RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 12.029 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
            RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        6.11661 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        7.73438 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        8.42347 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
      WBls:0000038 0.810729 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        5.36274 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        9.91475 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 0.934234 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
            RNASeq.brenneri.WBls:0000041.control_median
        3.14942 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
        3.47308 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
        46.4175 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
        5.58437 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
        70.3778 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
        7.56983 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
        8.59414 From_analysis: RNASeq.brenneri.WBls:0000041.control_mean
      WBls:0000101 0 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        5.38299 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00215442
    Ortholog (22)
    Paralog: WBGene00140966 Caenorhabditis brenneri From_analysis: Inparanoid_8
            GeneACeDB-Compara
      WBGene00151436 Caenorhabditis brenneri From_analysis: Inparanoid_8
            GeneACeDB-Compara
      WBGene00151852 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00152167 Caenorhabditis brenneri From_analysis: Inparanoid_8
            GeneACeDB-Compara
      WBGene00161914 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00164500 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00157262 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00161041 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in stress response to metal ion. Is an ortholog of C. elegans kreg-1. In C. elegans, kreg-1 is involved in stress response to copper ion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN16444
    Corresponding_CDS_history: CBN16444:np198
    Corresponding_transcript: CBN16444.1
    Other_sequence: CBC01903_1
      HC03220
      Oden_isotig26388
      Tcol_isotig02836
      Oden_isotig06527
      Acan_isotig20026
      Tcol_isotig02834
      HCC01445_1
      Tcol_isotig02835
  Experimental_info: Microarray_results: GPL14142_CBN16444_31-90_0.467_54_A
  Remark: [190507 pad] The CGC name Cbn-kreg-1.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene