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WormBase Tree Display for Gene: WBGene00155054

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Name Class

WBGene00155054SMapS_parentSequenceCbre_Contig139
IdentityVersion1
NameSequence_nameCBN16329
Molecular_nameCBN16329
CBN16329.1
CN26497
Public_nameCBN16329
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:51WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000020.138949From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
0.148374From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
0.15394From_analysisRNASeq.brenneri.WBls:0000002.control_median
0.159505From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
0.284782From_analysisRNASeq.brenneri.WBls:0000002.control_mean
0.298622From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
0.334678From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
0.442403From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
1.32529From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
RNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:00000240.040355From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
0.064402From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
WBls:00000380.617031From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
0.650177From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
0.683323From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (12)
WBls:00001010.138949From_analysisRNASeq.brenneri.total_over_all_stages.control_median
2.29153From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00215345
00215346
OrthologWBGene00019586Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00019587Caenorhabditis elegansFrom_analysisInparanoid_8
CSP26.g6469Caenorhabditis zanzibariFrom_analysisWormBase-Compara
Csp11.Scaffold629.g8845Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01495.g21276Caenorhabditis sinicaFrom_analysisWormBase-Compara
chrII_pilon.g3622Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (17)
Structured_descriptionAutomated_descriptionPredicted to enable protein tyrosine phosphatase activity. Is an ortholog of C. elegans K09F6.3 and K09F6.4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN16329
Corresponding_CDS_historyCBN16329:np197
Corresponding_transcriptCBN16329.1
Experimental_infoMicroarray_resultsGPL14142_CBN16329_4548-4607_0.968_1_A
MethodGene