WormBase Tree Display for Gene: WBGene00154521

WBGene00154521 SMap: S_parent: Sequence: Cbre_Contig36
  Identity: Version: 2
    Name: CGC_name: Cbn-upb-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN15796
      Molecular_name: CBN15796
        CBN15796.1
        CN16185
      Public_name: Cbn-upb-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:51 WBPerson4055 Event: Imported: from NGASP
        2 14 Sep 2010 16:22:40 WBPerson2970 Name_change: CGC_name: Cbn-upb-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: upb
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 12.0092 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        6.0046 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 101.692 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        124.037 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        149.961 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        161.19 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        97.3699 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
      WBls:0000038 72.5044 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        76.3658 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        80.2271 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 51.0685 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        63.7983 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00214934
    Ortholog (36)
    Paralog: WBGene00148803 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00157786 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00193308 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to be involved in nitrogen compound metabolic process. Is an ortholog of C. elegans upb-1. In C. elegans, upb-1 is involved in beta-alanine biosynthetic process via 3-ureidopropionate; thymine catabolic process; and uracil catabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN15796
    Corresponding_transcript: CBN15796.1
    Other_sequence (59)
  Experimental_info: Microarray_results: GPL14142_CBN15796_825-884_0.947_2_B
  Method: Gene