WormBase Tree Display for Gene: WBGene00153879

WBGene00153879 SMap: S_parent: Sequence: Cbre_Contig2
  Identity: Version: 1
    Name: CGC_name: Cbn-unc-84 From_analysis: Inferred_from_orthology
      Sequence_name: CBN15154
      Molecular_name: CBN15154
        CBN15154.1
        CN03602
      Other_name: CBN15154
      Public_name: Cbn-unc-84
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:29 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-unc-84
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 186.733 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        32.6064 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        340.86 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 11.8651 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        16.9372 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        18.1726 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        18.2501 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        8.89649 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
      WBls:0000038 10.4512 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        9.01019 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        9.73069 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
      WBls:0000041 (18)
      WBls:0000101 18.9836 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
        5.34943 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
    Ortholog: WBGene00006816 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00029473 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00065276 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00098767 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00126327 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g3838 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g13620 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g7890 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP29.g5234 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g13726 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g11587 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g10852 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g24142 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g17507 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00160.g5910 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-84 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g22061 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01402.g20703 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_01596 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_025735 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00461 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g12920 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0124920 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00224599 Brugia malayi From_analysis: WormBase-Compara
      chrX_pilon.g20442 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00239905 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00263514 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00264258 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00295961 Trichuris muris From_analysis: WormBase-Compara
      WBGene00299947 Trichuris muris From_analysis: WormBase-Compara
    Paralog (16)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Galactose-binding-like domain superfamily; Sad1 / UNC-like C-terminal; and SUN domain. Is an ortholog of C. elegans unc-84. In C. elegans, unc-84 is involved in several processes, including egg-laying behavior; nuclear migration along microtubule; and vulval development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN15154
    Corresponding_transcript: CBN15154.1
    Other_sequence (22)
  Experimental_info: Microarray_results: GPL14142_CBN15154_204-263_0.803_88_C
      GPL14142_CBN15154_2951-3010_0.936_3_A
      GPL14142_CBN15154_3199-3258_0.933_6_B
  Method: Gene