Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00143771

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00143771SMapS_parentSequenceCbre_Contig69
IdentityVersion1
NameCGC_nameCbn-cex-1From_analysisInferred_from_orthology
Sequence_nameCBN05046
Molecular_nameCBN05046
CBN05046.1
CN12183
Other_nameCBN05046
Public_nameCbn-cex-1
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-cex-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcex
RNASeq_FPKMWBls:00000021.14051From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
1.59609From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
1.60113From_analysisRNASeq.brenneri.WBls:0000002.control_median
1.60617From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
1.6577From_analysisRNASeq.brenneri.WBls:0000002.control_mean
1.96494From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
2.37951From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
3.6002From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
4.28955From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
RNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
29.6386From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
48.9152From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
58.4096From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
69.8984From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
78.0081From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
WBls:00000385.73977From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
6.26011From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
6.78044From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (16)
WBls:00001013.6002From_analysisRNASeq.brenneri.total_over_all_stages.control_median
8.42085From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
Ortholog (23)
ParalogWBGene00142583Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00157662Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00145798Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00148842Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00157086Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190613Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: EF-hand domain pair. Is an ortholog of C. elegans cex-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN05046
Corresponding_transcriptCBN05046.1
Other_sequence (15)
Experimental_infoMicroarray_resultsGPL14142_CBN05046_175-234_0.890_25_C
GPL14142_CBN05046_280-339_0.936_7_B
GPL14142_CBN05046_521-580_0.967_1_A
MethodGene