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WormBase Tree Display for Gene: WBGene00143088

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Name Class

WBGene00143088SMapS_parentSequenceCbre_Contig112
IdentityVersion1
NameCGC_nameCbn-dpy-5From_analysisInferred_from_orthology
Sequence_nameCBN04363
Molecular_nameCBN04363
CBN04363.1
CN15562
Other_nameCBN04363
Public_nameCbn-dpy-5
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-dpy-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdpy
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
RNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:00000241.31998From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
1.43094From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
2.22444From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
2.74192From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
3.95641From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
WBls:00000381599.07From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
1636.35From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
1673.63From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (17)
WBls:0000101261.328From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
45.7496From_analysisRNASeq.brenneri.total_over_all_stages.control_median
Ortholog (26)
ParalogWBGene00141083Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00142175Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00142341Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00142355Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00163006Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00160526Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00161985Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00190111Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00143229Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00146298Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00158904Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00194356Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00156285Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00146325Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00143641Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00192264Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00163988Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00164354Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00159517Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00146964Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00159318Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00159676Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00153323Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00162492Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00148653Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00145063Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00159186Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00163723Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00148222Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00144776Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00160811Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00153505Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00152723Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00161979Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00154300Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00161742Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00190994Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00193417Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00146011Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00155097Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00162767Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00156359Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00143222Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00139734Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00139964Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00141521Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00145057Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00151301Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00153945Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00162583Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00138758Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00139047Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00140917Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00142429Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00142803Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00154599Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00143187Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00143514Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00143853Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00145469Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00147646Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00149175Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00149311Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00149407Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00150266Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00150270Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00153014Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00154093Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00159509Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00160272Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00161262Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00191472Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00192999Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00271761Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00271762Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00271763Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
Structured_descriptionAutomated_descriptionIs an ortholog of C. elegans dpy-5. In C. elegans, dpy-5 is involved in cuticle development involved in collagen and cuticulin-based cuticle molting cycle and post-embryonic body morphogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN04363
Corresponding_transcriptCBN04363.1
Other_sequence (42)
Experimental_infoMicroarray_resultsGPL14142_CBN04363_275-334_0.798_22_B
GPL14142_CBN04363_581-640_0.950_2_C
GPL14142_CBN04363_601-660_0.952_1_A
MethodGene