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WormBase Tree Display for Gene: WBGene00140518

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Name Class

WBGene00140518SMapS_parentSequenceCbre_Contig23
IdentityVersion1
NameSequence_nameCBN01793
Molecular_nameCBN01793
CBN01793.1
CN26549
Public_nameCBN01793
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:50WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000020.202272From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
0.331193From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
0.434619From_analysisRNASeq.brenneri.WBls:0000002.control_median
0.538044From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
0.64493From_analysisRNASeq.brenneri.WBls:0000002.control_mean
0.723009From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
0.802137From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
1.35361From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
2.49904From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
WBls:00000041.45402From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
2.90804From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:000002412.4703From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
20.7908From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
22.7111From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
25.1382From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
9.93329From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
WBls:00000381.91892From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
2.31895From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
2.71898From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (14)
WBls:00001010.567167From_analysisRNASeq.brenneri.total_over_all_stages.control_median
1.06492From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00203565
00203566
00203567
00203568
Ortholog (20)
ParalogWBGene00142143Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00146207Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00148722Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00155297Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00161487Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192300Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00191021Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable metal ion binding activity and peptidase inhibitor activity. Predicted to be involved in superoxide metabolic process. Predicted to be located in extracellular region. Is an ortholog of C. elegans T01D3.3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN01793
Corresponding_CDS_historyCBN01793:np197
Corresponding_transcriptCBN01793.1
Other_sequenceJO467874.1
Dviv_isotig14851
CRC12492_1
JI166072.1
Acan_isotig14254
Dviv_isotig14852
Oden_isotig21367
Experimental_infoMicroarray_resultsGPL14142_CBN01793_1341-1400_0.858_57_B
GPL14142_CBN01793_1490-1549_0.873_44_A
GPL14142_CBN01793_1646-1705_0.869_47_C
MethodGene