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WormBase Tree Display for Gene: WBGene00139338

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Name Class

WBGene00139338SMapS_parentSequenceCbre_Contig2
IdentityVersion1
NameCGC_nameCbn-dsc-1From_analysisInferred_from_orthology
Sequence_nameCBN00613
Molecular_nameCBN00613
CBN00613.1
CN04151
Other_nameCBN00613
Public_nameCbn-dsc-1
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:29WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-dsc-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdsc
RNASeq_FPKMWBls:00000020From_analysis (12)
WBls:00000040.289343From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
3.24351From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
6.19767From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:00000240.430211From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
0.715559From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
0.76486From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
1.24478From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
2.322From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
WBls:00000380.325224From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
0.650447From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (12)
WBls:00001010.336539From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
0From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00202655
Ortholog (21)
Paralog (12)
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity. Is an ortholog of C. elegans dsc-1. In C. elegans, dsc-1 is involved in positive regulation of defecation rhythm and regulation of DNA-templated transcription.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN00613
Corresponding_transcriptCBN00613.1
Other_sequenceTDC00719_1
CB038760.1
Acan_isotig13973
Experimental_infoMicroarray_resultsGPL14142_CBN00613_556-615_0.936_9_B
GPL14142_CBN00613_595-654_0.936_8_C
GPL14142_CBN00613_732-791_0.953_2_A
MethodGene