WormBase Tree Display for Gene: WBGene00137168

WBGene00137168 SMap: S_parent: Sequence: Cjap.Contig18194
  Identity: Version: 2
    Name: CGC_name: Cjp-mec-2 From_analysis: Inferred_from_orthology
      Sequence_name: CJA17963
      Molecular_name: CJA17963
        CJA17963.1
        JA56403
      Public_name: Cjp-mec-2
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-mec-2
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mec
    RNASeq_FPKM: WBls:0000004 12.3967 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 20.7022 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 11.0865 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        11.6615 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        12.2365 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 1.50293 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        1.6252 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        1.96709 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        2.48386 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        2.94739 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        3.12706 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        3.41091 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        3.88491 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        4.55376 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        5.58781 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
      WBls:0000101 3.88491 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        6.26449 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00200943
      00200944
    Ortholog (30)
    Paralog: WBGene00119389 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00121056 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00125890 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00126717 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00128531 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00129407 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00132574 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00124674 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00180625 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00216803 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in plasma membrane. Is an ortholog of C. elegans mec-2. In C. elegans, mec-2 is involved in positive regulation of multicellular organismal process and response to mechanical stimulus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA17963
    Corresponding_transcript: CJA17963.1
    Other_sequence: MAC01381_1
      FF679952.1
      HG10759
      Hbac_isotig01653
      Tcir_isotig31574
      MIC00344_1
      BMC13599_1
      Tcol_isotig22082
      Name_isotig03888
      FC554053.1
      SR02912
      MI06838
      JI477273.1
      FC546260.1
      PT02656
      NBC08840_1
      JO468600.1
      GR12988
      PT01258
      JI459988.1
      MH01445
      TSC06927_1
      Acan_isotig04534
      FF680235.1
      Dviv_isotig22388
      CV199421.1
      HG08122
      GR977180.1
      MIC05259_1
      FC544080.1
      CR06338
      HGC01757_1
      Tcol_isotig17311
      HBC01874_1
      SC00509
      EX912633.1
      XI00375
      ES411507.1
      Acan_isotig06423
      SS01733
      HBC18275_1
      FC817044.1
      FC811502.1
      MA02051
      EX012048.1
      Oden_isotig17928
      JI178431.1
      CRC01911_1
      AW505792.1
      ACC01856_1
      HG00878
      FF680327.1
      GRC02084_1
      Dviv_isotig22389
      JI175625.1
      HBC00410_1
      Dviv_isotig18454
      PSC02902_1
      GT571392.1
      MH07867
      HGC02865_1
      Tcir_isotig26399
      SSC00071_1
      FC550166.1
      BM01275
      FF680003.1
      BUC01324_1
      Hbac_isotig03790
      BU666077.1
      BMC11860_1
      BXC02315_1
      SRC01331_1
      EX913662.1
      HBC08227_1
      Acan_isotig04533
      ES410250.1
      GW410777.1
      HGC01185_1
      Oden_isotig26555
      Dviv_isotig20743
      NB08743
      FC554676.1
      NAC00825_1
      Acan_isotig06424
      Oden_isotig22546
      OOC02700_1
      ES563491.1
      XIC02352_1
      Tcol_isotig13095
      PVC00433_1
      HBC02813_1
      HG03281
  Experimental_info: Expr_pattern: Expr1073086
    Microarray_results: GPL14145_CJA17963_1061-1120_0.943_2_B
      GPL14145_CJA17963_1067-1126_0.960_1_A
      GPL14145_CJA17963_706-765_0.811_41_C
  Method: Gene