WormBase Tree Display for Gene: WBGene00135987

WBGene00135987 SMap: S_parent: Sequence: Cjap.Contig17612
  Identity: Version: 2
    Name: CGC_name: Cjp-unc-112 From_analysis: Inferred_from_orthology
      Sequence_name: CJA16784
      Molecular_name (3)
      Public_name: Cjp-unc-112
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-unc-112
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 136.588 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 79.0749 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 88.2556 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        91.1173 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        93.979 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 29.0433 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        31.6866 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        31.8595 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        32.8763 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        33.7033 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        34.5303 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        34.9035 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        37.7844 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        39.0192 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        42.4288 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
      WBls:0000101 37.7844 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        52.0866 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00200008
    Ortholog (34)
    Paralog: WBGene00134500 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00212350 Caenorhabditis japonica From_analysis: TreeFam
    Structured_description: Automated_description: Predicted to be involved in integrin-mediated signaling pathway. Is an ortholog of C. elegans unc-112. In C. elegans, unc-112 is involved in several processes, including muscle cell cellular homeostasis; positive regulation of supramolecular fiber organization; and regulation of engulfment of apoptotic cell. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA16784
    Corresponding_transcript: CJA16784.1
    Other_sequence: PTC04724_1
      HC05762
      CRC05378_1
      EX566244.1
      EX564760.1
      Oden_isotig18734
      PSC03827_1
      HSC00120_1
      HSC00534_1
      PP00302
      EX500193.1
      FC547602.1
      HCC07634_1
      TCC00624_1
      AYC03133_1
      ES566133.1
      JI168192.1
      HGC06699_1
      HSC00120_2
      MCC02496_1
      HG06612
      HS00311
      GW413099.1
      TX01140
      HGC10375_1
      Tcol_isotig14066
      SS00610
      CR05312
      Hbac_isotig02542
      SSC04146_1
      EX555434.1
      SS01809
      EX559344.1
      PPC00189_1
      EX557748.1
      TSC12039_1
      HBC12983_1
      GR12330
      HSC01427_1
      MC02818
      HSC00781_1
      CR01259
      CJC03668_1
      PT00156
      HS01302
      CRC02526_1
      ACC12187_1
      BXC04442_1
      HS00278
      SSC00560_1
      HG01235
      EX008953.1
      Oden_isotig25626
      AE03393
      GP03063
      GPC02282_1
      EX008876.1
      GE625592.1
      EX911296.1
      Dviv_isotig29289
      Dviv_isotig27248
      Dviv_isotig17398
      EX542526.1
      Dviv_isotig17399
      HG00162
      HBC20401_1
      FF679192.1
      HS01334
      HGC03745_1
      EX557757.1
      Name_isotig01475
      Acan_isotig07556
      EX557108.1
      HBC02730_1
      HG00669
      HS00394
      HS00389
      EX013235.1
      HSC00881_1
      Tcol_isotig24858
      Tcol_isotig10459
      FF678244.1
      GRC01190_1
  Experimental_info: Expr_pattern: Expr1080028
    Microarray_results: GPL14145_CJA16784_1583-1642_0.936_2_C
      GPL14145_CJA16784_1804-1863_0.887_20_A
      GPL14145_CJA16784_1914-1973_0.886_23_B
  Method: Gene