WormBase Tree Display for Gene: WBGene00134126

WBGene00134126 SMap: S_parent: Sequence: Cjap.Contig18023
  Identity: Version: 2
    Name: CGC_name: Cjp-ceh-20 From_analysis: Inferred_from_orthology
      Sequence_name: CJA14922
      Molecular_name: CJA14922
        CJA14922.1
        JA02847
      Public_name: Cjp-ceh-20
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:22 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-ceh-20
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ceh
    RNASeq_FPKM: WBls:0000004 95.012 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 36.8294 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 27.3836 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        30.1743 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        32.965 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 10.5754 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        10.5812 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        10.8436 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        11.2647 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        11.9482 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        12.3828 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        12.4099 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        13.6805 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        7.4746 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        7.69634 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
      WBls:0000101 12.3828 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        21.4568 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00198553
      00198554
      00198555
    Ortholog (31)
    Paralog: WBGene00119963 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00122670 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00121693 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA binding activity and DNA-binding transcription factor activity. Predicted to be located in nucleus. Is an ortholog of C. elegans ceh-20. In C. elegans, ceh-20 is involved in several processes, including cell differentiation; positive regulation of mesodermal cell fate specification; and regulation of asymmetric cell division. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA14922
    Corresponding_transcript: CJA14922.1
    Other_sequence: Tcir_isotig16195
      RSC04636_1
      CJC10663_1
      TSC04863_1
      SS01033
      TSC07623_1
      Acan_isotig08886
      EY472513.1
      FK803105.1
      CRC04972_1
      XI02493
      ES413310.1
      MI00380
      JI168882.1
      Acan_isotig05371
      TS00706
      Oden_isotig19331
      MAC00091_1
      BMC02845_1
      ACC29026_1
      TS00071
      GR978076.1
      Tcol_isotig26310
      SC01450
      FG347943.1
      ES560626.1
      Dviv_isotig23742
      CRC10624_1
      MHC03795_1
      HBC14355_1
      ES565221.1
      ACC39315_1
      MA00082
      XI01510
      ES565107.1
      XIC03085_1
      ES409985.1
      Acan_isotig05372
      XIC00261_1
      EX910432.1
      GRC00573_1
      Hbac_isotig01581
      AW506438.1
      EY468946.1
      ES563597.1
      MH07707
      CRC11909_1
      RS06921
      PPC14599_1
      ES562760.1
      Tcir_isotig06547
      MH01120
      MIC01261_1
      HBC19380_1
  Experimental_info: Expr_pattern: Expr1091843
    Microarray_results: GPL14145_CJA14922_271-330_0.855_27_A
      GPL14145_CJA14922_425-484_0.903_6_C
      GPL14145_CJA14922_599-658_0.916_4_B
  Method: Gene