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WormBase Tree Display for Gene: WBGene00132330

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Name Class

WBGene00132330SMapS_parentSequenceCjap.Contig17110
IdentityVersion3
NameCGC_nameCjp-lron-15From_analysisInferred_from_orthology
Sequence_nameCJA13126
Molecular_nameCJA13126a
CJA13126a.1
JA66615
CJA13126b
JA43072
CJA13126b.1
Public_nameCjp-lron-15
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:22WBPerson4055EventImportedNGASP import
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
302 Mar 2012 16:44:52WBPerson2970Name_changeCGC_nameCjp-lron-15
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlron
RNASeq_FPKMWBls:00000047.19149From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000273.65431From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000382.67515From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
3.26608From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
3.85701From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.448061From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
0.570999From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
0.667532From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
0.698268From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
0.844727From_analysisRNASeq.japonica.WBls:0000041.control_median
0.850502From_analysisRNASeq.japonica.WBls:0000041.control_mean
0.991185From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
1.07338From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
1.09505From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
1.25954From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
WBls:00001011.07338From_analysisRNASeq.japonica.total_over_all_stages.control_median
1.86015From_analysisRNASeq.japonica.total_over_all_stages.control_mean
Ortholog (12)
ParalogWBGene00126038Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00127712Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00127878Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00133120Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00134178Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00134711Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Leucine-rich repeat; Leucine-rich repeat domain superfamily; Leucine rich repeat; and Leucine-rich repeat, typical subtype. Is an ortholog of C. elegans lron-15.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA13126a
CJA13126b
Corresponding_transcriptCJA13126a.1
CJA13126b.1
Other_sequenceJI164988.1
MethodGene