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WormBase Tree Display for Gene: WBGene00129221

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Name Class

WBGene00129221SMapS_parentSequenceCjap.Contig18123
IdentityVersion2
NameCGC_nameCjp-pis-1From_analysisInferred_from_orthology
Sequence_nameCJA10017
Molecular_nameCJA10017
CJA10017.1
JA56161
Public_nameCjp-pis-1
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:21WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-pis-1
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpis
RNASeq_FPKMWBls:000000419.3837From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000277.99508From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000388.20612From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
8.54869From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
8.89127From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:000004114.8277From_analysisRNASeq.japonica.WBls:0000041.control_median
16.9366From_analysisRNASeq.japonica.WBls:0000041.control_mean
2.25777From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
2.41409From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
26.2322From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
2.98412From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
32.2063From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
32.9034From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
33.0722From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
3.42314From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
WBls:000010113.8438From_analysisRNASeq.japonica.total_over_all_stages.control_mean
8.20612From_analysisRNASeq.japonica.total_over_all_stages.control_median
Ortholog (30)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: BRCA1 C Terminus (BRCT) domain; BRCT domain; and BRCT domain superfamily. Is an ortholog of C. elegans pis-1. In C. elegans, pis-1 is involved in programmed cell death.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA10017
Corresponding_transcriptCJA10017.1
Other_sequence (94)
Experimental_infoExpr_patternExpr1086656
Expr1090563
Expr1091773
Microarray_resultsGPL14145_CJA06523_769-828_0.957_2_A
GPL14145_CJA10017_1648-1707_0.936_1_C
GPL14145_CJA10017_466-525_0.821_65_B
GPL14145_CJA10017_718-777_0.864_44_A
GPL14145_CJA23843_108-167_0.966_1_A
MethodGene