WormBase Tree Display for Gene: WBGene00127443

WBGene00127443 SMap: S_parent: Sequence: Cjap.Contig18211
  Identity: Version: 2
    Name: CGC_name: Cjp-srr-4 From_analysis: Inferred_from_orthology
      Sequence_name: CJA08239
      Molecular_name: CJA08239
        CJA08239.1
        JA49749
      Public_name: Cjp-srr-4
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-srr-4
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: srr
    RNASeq_FPKM: WBls:0000004 83.2221 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 56.4372 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 25.6786 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        27.3391 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        28.9997 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 12.0418 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        18.8147 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        3.07607 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        3.34777 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        3.81688 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        3.82056 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        3.96311 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        4.10566 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        4.61985 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        6.70541 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
      WBls:0000101 19.0755 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        4.61985 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    Ortholog (26)
    Paralog: WBGene00132230 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00131696 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00128962 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00211561 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00175354 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00212177 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Caenorhabditis protein of unknown function, DUF267 and Protein of unknown function DUF267, Caenorhabditis species. Is an ortholog of C. elegans srr-4. In C. elegans, srr-4 is involved in determination of adult lifespan. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA08239
    Corresponding_transcript: CJA08239.1
    Other_sequence: CJC04006_1
  Experimental_info: Expr_pattern: Expr1078893
    Microarray_results: GPL14145_CJA08239_1082-1141_0.946_4_A
      GPL14145_CJA08239_717-776_0.898_29_C
  Method: Gene