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WormBase Tree Display for Gene: WBGene00123410

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Name Class

WBGene00123410SMapS_parentSequenceCjap.Contig6766
IdentityVersion4
NameSequence_nameCJA04206
Molecular_nameCJA04206a
CJA04206a.1
JA63717
CJA04206b
JA53569
CJA04206b.1
Public_nameCJA04206
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:20WBPerson4055EventImportedNGASP import
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
304 Jun 2020 14:38:21WBPerson1983Name_changeCGC_nameCjp-snpc-1.2
428 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000043.39816From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000270.705111From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000380.595576From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
0.639586From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
0.683596From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.707375From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
0.779437From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
0.91839From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
1.05703From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
19.2761From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
20.7644From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
20.8434From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
5.44602From_analysisRNASeq.japonica.WBls:0000041.control_median
9.27264From_analysisRNASeq.japonica.WBls:0000041.control_mean
9.83502From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
WBls:00001010.91839From_analysisRNASeq.japonica.total_over_all_stages.control_median
6.12028From_analysisRNASeq.japonica.total_over_all_stages.control_mean
Ortholog (18)
Paralog (991)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: snRNA-activating protein complex subunit 1 and Small nuclear RNA activating complex (SNAPc), subunit 1. Is an ortholog of C. elegans snpc-1.2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA04206a
CJA04206b
Corresponding_transcriptCJA04206a.1
CJA04206b.1
Other_sequenceCR01551
CJC03176_1
CRC03671_1
Experimental_infoExpr_patternExpr1077246
Microarray_resultsGPL14145_CJA04206_294-353_0.770_103_B
GPL14145_CJA04206_602-661_0.839_68_C
GPL14145_CJA04206_665-724_0.876_45_A
Remark[210528 pad] The CGC name Cjp-snpc-1.2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene