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WormBase Tree Display for Gene: WBGene00120561

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Name Class

WBGene00120561SMapS_parentSequenceCjap.Contig17792
IdentityVersion3
NameCGC_nameCjp-gmeb-2From_analysisInferred_from_orthology
Sequence_nameCJA01357
Molecular_nameCJA01357
CJA01357.1
JA12017
Public_nameCjp-gmeb-2
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:20WBPerson4055EventImportedNGASP import
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
322 Sep 2011 11:42:50WBPerson2970Name_changeCGC_nameCjp-gmeb-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgmeb
RNASeq_FPKMWBls:000000429.937From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002713.9332From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003810.6164From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
9.01336From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
9.81488From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
WBls:00000411.38104From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
1.45965From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
1.99762From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
2.0532From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
2.18733From_analysisRNASeq.japonica.WBls:0000041.control_mean
2.18738From_analysisRNASeq.japonica.WBls:0000041.control_median
2.32156From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
2.41611From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
2.88354From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
2.98592From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
WBls:00001012.41611From_analysisRNASeq.japonica.total_over_all_stages.control_median
6.23066From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00187667
Ortholog (29)
ParalogWBGene00132362Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00135576Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Is an ortholog of C. elegans gmeb-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA01357
Corresponding_transcriptCJA01357.1
Other_sequenceMI00862
JI169170.1
MI02261
JI483722.1
MIC00282_1
JI171737.1
Experimental_infoExpr_patternExpr1070691
Expr1083483
Microarray_resultsGPL14145_CJA01357_153-212_0.877_33_C
GPL14145_CJA01357_163-222_0.845_51_B
GPL14145_CJA01357_634-693_0.753_98_A
GPL14145_CJA26875_273-332_0.940_1_A
MethodGene