WormBase Tree Display for Gene: WBGene00120540

WBGene00120540 SMap: S_parent: Sequence: Cjap.Contig16285
  Identity: Version: 2
    Name: CGC_name: Cjp-sym-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA01336
      Molecular_name: CJA01336
        CJA01336.1
        JA05491
      Public_name: Cjp-sym-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:20 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-sym-1
        2 29 Jul 2011 11:13:36 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sym
    RNASeq_FPKM: WBls:0000004 215.348 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 344.271 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 221.312 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        237.749 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        254.186 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 11.9463 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        12.1326 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        1.70196 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        2.91011 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        3.97496 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        4.87687 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        5.19692 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        5.51697 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        6.46662 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        8.67317 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
      WBls:0000101 83.6038 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        8.67317 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    Ortholog (27)
    Paralog: WBGene00124014 Caenorhabditis japonica From_analysis: TreeFam
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Leucine-rich repeat; Leucine-rich repeat domain superfamily; Leucine rich repeat; and Leucine-rich repeat, typical subtype. Is an ortholog of C. elegans sym-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA01336
    Corresponding_transcript: CJA01336.1
    Other_sequence (57)
  Experimental_info: Expr_pattern: Expr1072697
    Microarray_results: GPL14145_CJA01336_1322-1381_0.819_46_B
      GPL14145_CJA01336_1631-1690_0.926_1_A
      GPL14145_CJA01336_852-911_0.794_69_C
  Method: Gene