WormBase Tree Display for Gene: WBGene00119963

WBGene00119963 SMap: S_parent: Sequence: Cjap.Contig17597
  Identity: Version: 2
    Name: CGC_name: Cjp-ceh-60 From_analysis: Inferred_from_orthology
      Sequence_name: CJA00759
      Molecular_name: CJA00759
        CJA00759.1
        JA08276
      Public_name: Cjp-ceh-60
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:20 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-ceh-60
        2 29 Jul 2011 11:13:36 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ceh
    RNASeq_FPKM: WBls:0000004 8.00135 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 1.54995 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 1.48 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        1.67214 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        1.86428 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 10.7657 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        11.6998 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        13.7187 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        5.56273 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        6.05633 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        6.17383 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        7.58662 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        7.84569 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        8.10475 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        8.70856 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
      WBls:0000101 6.17383 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        6.35108 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00187176
      00187177
    Ortholog: WBGene00017690 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00032103 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00051483 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00155316 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CSP26.g6787 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g17450 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g2701 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g26496 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g284 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g19015 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP40.g15703 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00071.g3385 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-ceh-60 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold626.g6418 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00292.g8812 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_00335 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_024604 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_X0190200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19258 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00134126 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00122670 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00121693 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans ceh-60. In C. elegans, ceh-60 is involved in dopaminergic neuron differentiation and regulation of transcription by RNA polymerase II. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA00759
    Corresponding_transcript: CJA00759.1
    Other_sequence: ASC06927_1
      JI464128.1
      Name_isotig06094
  Experimental_info: Expr_pattern: Expr1090413
    Microarray_results: GPL14145_CJA00759_189-248_0.707_81_C
      GPL14145_CJA00759_543-602_0.911_16_B
      GPL14145_CJA00759_811-870_0.941_3_A
  Method: Gene