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WormBase Tree Display for Gene: WBGene00118104

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Name Class

WBGene00118104SMapS_parentSequencePPA_ChrIII
IdentityVersion2
NameCGC_namePpa-zfp-1From_analysisInferred_from_orthology
Sequence_namePPA28550
Molecular_namePPA28550
PPA28550.1
PP59702
Other_nameGENEPREDICTION_SNAP300000085342
GENEPREDICTION_SNAP300000085343
UMA-S112-3.21Person_evidenceWBPerson606
Public_namePpa-zfp-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:07WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:51WBPerson4055EventAcquires_mergeWBGene00118105
Acquires_mergeWBGene00118105
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classzfp
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
OrthologWBGene00006975Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00055189Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00164580Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00224640Brugia malayiFrom_analysisWormBase-Compara
WBGene00244800Onchocerca volvulusFrom_analysisWormBase-Compara
ParalogWBGene00091368Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103581Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00104422Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Zinc finger, RING/FYVE/PHD-type; PHD-zinc-finger like domain; Zinc finger, PHD-type; Zinc finger, FYVE/PHD-type; and PHD-finger. Is an ortholog of C. elegans zfp-1. In C. elegans, zfp-1 is involved in regulatory ncRNA-mediated post-transcriptional gene silencing.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA28550
Corresponding_transcriptPPA28550.1
Other_sequence (22)
MethodGene