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WormBase Tree Display for Gene: WBGene00112315

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Name Class

WBGene00112315SMapS_parentSequencePPA_ChrII
IdentityVersion2
NameCGC_namePpa-pdha-1From_analysisInferred_from_orthology
Sequence_namePPA22761
Molecular_namePPA22761
PPA22761.1
PP75646
Other_nameGENEPREDICTION_SNAP300000079502
UMS-S421-0.67Person_evidenceWBPerson606
Public_namePpa-pdha-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
208 Dec 2011 12:03:58WBPerson2970Name_changeCGC_namePpa-pdha-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpdha
RNASeq_FPKMWBls:000003298.5825From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:0000101132.604From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
77.0622From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
98.5825From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
GO_annotation00183643
00183644
00183645
00183646
Ortholog (39)
ParalogWBGene00107454Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable pyruvate dehydrogenase (acetyl-transferring) activity. Predicted to be involved in acetyl-CoA biosynthetic process from pyruvate. Predicted to be located in intracellular membrane-bounded organelle. Is an ortholog of C. elegans pdha-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA22761
Corresponding_CDS_historyPPA22761:pp274
Corresponding_transcriptPPA22761.1
Other_sequence (146)
Experimental_infoMicroarray_resultsGPL14372_Probes_64400
GPL14372_Probes_64401
GPL14372_Probes_64402
GPL14372_Probes_64403
Expression_clusterWBPaper00041466:PP_germline-ablation_regulated
WBPaper00041606:PP_X.nematophila_regulated
MethodGene