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WormBase Tree Display for Gene: WBGene00109935

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Name Class

WBGene00109935SMapS_parentSequencePPA_ChrX
IdentityVersion1
NameCGC_namePpa-sym-1From_analysisInferred_from_orthology
Sequence_namePPA20381
Molecular_namePPA20381
PPA20381.1
PP13617
Other_nameGENEPREDICTION_SNAP300000077191
UMA-S2857-8.2Person_evidenceWBPerson606
Public_namePpa-sym-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsym
RNASeq_FPKMWBls:00000328.40921From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001013.31034From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
3.90652From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
Ortholog (27)
ParalogWBGene00112607Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Leucine-rich repeat; Leucine-rich repeat domain superfamily; Leucine rich repeat; and Leucine-rich repeat, typical subtype. Is an ortholog of C. elegans sym-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA20381
Corresponding_transcriptPPA20381.1
Other_sequence (36)
Experimental_infoMicroarray_resultsGPL14372_Probes_76755
GPL14372_Probes_76756
GPL14372_Probes_76757
Expression_clusterWBPaper00064862:Ppa-sul-2(tu1069)_J4.12_Down
MethodGene