WormBase Tree Display for Gene: WBGene00108837

WBGene00108837 SMap: S_parent: Sequence: PPA_ChrII
  Identity: Version: 4
    Name: CGC_name: Ppa-ifa-1.1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA19283
      Molecular_name: PPA19283
        PPA19283.1
        PP56503
      Other_name: GENEPREDICTION_SNAP300000076096
        UMM-S10-15.7 Person_evidence: WBPerson606
      Public_name: Ppa-ifa-1.1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
        2 08 May 2019 10:09:27 WBPerson1983 Name_change: CGC_name: Ppa-ifa-4.1
        3 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        4 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Ppa-ifa-1.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ifa
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
            RNASeq.pristionchus.total_over_all_stages.control_mean
    Ortholog (34)
    Paralog: WBGene00093410 Pristionchus pacificus From_analysis: Inparanoid_7
            WormBase-Compara
      WBGene00108834 Pristionchus pacificus From_analysis: Inparanoid_7
      WBGene00110212 Pristionchus pacificus From_analysis: Inparanoid_7
      WBGene00204950 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00273533 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281434 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00305167 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Intermediate filament, rod domain and Intermediate filament protein. Is an ortholog of C. elegans ifa-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA19283
    Corresponding_transcript: PPA19283.1
    Other_sequence (11)
  Experimental_info: Microarray_results: GPL14372_Probes_27206
      GPL14372_Probes_27207
    Expression_cluster: WBPaper00041207:PP_dauer_down
  Remark: [210528 pad] The CGC name Ppa-ifa-4.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene