WormBase Tree Display for Gene: WBGene00106565
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| WBGene00106565 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Ppa-pptr-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA17011 | ||||||||
| Molecular_name | PPA17011 | ||||||||
| PPA17011.1 | |||||||||
| PP71523 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000073729 | ||||||||
| GENEPREDICTION_SNAP300000073731 | |||||||||
| UMA-S2842-1.46 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-pptr-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00106567 | ||||
| 3 | 08 Feb 2019 15:42:27 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:24 | WBPerson1983 | Name_change | CGC_name | Ppa-pptr-1 | ||||
| 5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-pptr-1 | ||||
| Acquires_merge | WBGene00106567 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pptr | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
| GO_annotation | 00180813 | ||||||||
| 00180814 | |||||||||
| 00180815 | |||||||||
| Ortholog (50) | |||||||||
| Paralog | WBGene00115981 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to enable protein phosphatase regulator activity. Predicted to be involved in signal transduction. Predicted to be part of protein phosphatase type 2A complex. Is an ortholog of C. elegans pptr-1. In C. elegans, pptr-1 is involved in several processes, including P granule assembly; determination of adult lifespan; and negative regulation of insulin receptor signaling pathway. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA17011 | |||||||
| Corresponding_transcript | PPA17011.1 | ||||||||
| Other_sequence (59) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_14559 | |||||||
| GPL14372_Probes_14560 | |||||||||
| GPL14372_Probes_14563 | |||||||||
| Remark | [190208 pad] The CGC name Ppa-pptr-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-pptr-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
