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WormBase Tree Display for Gene: WBGene00105613

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Name Class

WBGene00105613SMapS_parentSequencePPA_ChrIV
IdentityVersion2
NameSequence_namePPA16059
Molecular_namePPA16059
PPA16059.1
PP53814
Other_nameGENEPREDICTION_SNAP300000072472
UMM-S283-3.36Person_evidenceWBPerson606
Public_namePPA16059
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:52WBPerson4055EventAcquires_mergeWBGene00204816
Acquires_mergeWBGene00204816
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000003240.5546From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010125.6821From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
36.4917From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Ortholog (148)
Paralog (27)
Structured_descriptionAutomated_descriptionEnriched in intestine based on RNA-seq studies. Is predicted to encode a protein with the following domains: Short-chain dehydrogenase/reductase SDR; short chain dehydrogenase; and NAD(P)-binding domain superfamily.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA16059
Corresponding_transcriptPPA16059.1
Other_sequenceCBC08136_1
Experimental_infoMicroarray_resultsGPL14372_Probes_44034
GPL14372_Probes_44035
GPL14372_Probes_44036
GPL14372_Probes_44037
GPL14372_Probes_44038
GPL14372_Probes_44040
GPL14372_Probes_44041
GPL14372_Probes_44042
GPL14372_Probes_44043
Expression_clusterWBPaper00041472:Phosphorylated_protein
WBPaper00049334:PE_intestine_enriched
WBPaper00050265:C.albidus_vs_OP50_downregulated
WBPaper00050265:C.albidus_vs_OP50_upregulated
WBPaper00050265:C.curvatus_vs_OP50_downregulated
WBPaper00050265:C.curvatus_vs_OP50_upregulated
WBPaper00041207:PP_dauer_up
MethodGene