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WormBase Tree Display for Gene: WBGene00101966

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Name Class

WBGene00101966SMapS_parentSequencePPA_ChrV
IdentityVersion4
NameCGC_namePpa-hgo-1Inferred_automaticallyfrom gene merge
Sequence_namePPA12412
Molecular_namePPA12412
PPA12412.1
PP54992
Other_nameGENEPREDICTION_SNAP300000068863
GENEPREDICTION_SNAP300000068864
UMS-S435-1.36Person_evidenceWBPerson606
Public_namePpa-hgo-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
217 Nov 2017 15:19:43WBPerson4055Name_changeCGC_namePpa-hgo-1
324 Nov 2017 09:46:49WBPerson4055EventAcquires_mergeWBGene00101967
424 Nov 2017 09:46:52WBPerson4055EventAcquires_mergeWBGene00204533
Acquires_mergeWBGene00101967
WBGene00204533
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhgo
RNASeq_FPKMWBls:000003217.5303From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001016.90161From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
8.14397From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00178872
00178873
00178874
Ortholog (31)
Structured_descriptionAutomated_descriptionPredicted to enable homogentisate 1,2-dioxygenase activity. Predicted to be involved in L-phenylalanine catabolic process and tyrosine metabolic process. Is an ortholog of C. elegans hgo-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA12412
Corresponding_CDS_historyPPA12412:pp270
PPA12412:pp274
Corresponding_transcriptPPA12412.1
Other_sequence (140)
Experimental_infoMicroarray_resultsGPL14372_Probes_1109
GPL14372_Probes_36782
GPL14372_Probes_36783
GPL14372_Probes_36784
GPL14372_Probes_36785
GPL14372_Probes_36786
Expression_clusterWBPaper00041606:PP_X.nematophila_regulated
MethodGene