WormBase Tree Display for Gene: WBGene00099877
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WBGene00099877 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Identity | Version | 7 | ||||
Name | CGC_name | Ppa-unc-105 | From_analysis | Inferred_from_orthology | ||
Sequence_name | PPA10323 | |||||
Molecular_name (3) | ||||||
Other_name | GENEPREDICTION_SNAP300000066805 | |||||
GENEPREDICTION_SNAP300000079328 | ||||||
UMA-S10-87.27 | Person_evidence | WBPerson606 | ||||
Public_name | Ppa-unc-105 | |||||
Species | Pristionchus pacificus | |||||
History | Version_change (7) | |||||
Acquires_merge | WBGene00112141 | |||||
Status | Live | |||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | unc | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | ||
RNASeq.pristionchus.WBls:0000032.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||||||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||
RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
RNASeq.pristionchus.WBls:0000101.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | ||||||
RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
GO_annotation | 00177976 | |||||
00177977 | ||||||
00177978 | ||||||
00177979 | ||||||
00177980 | ||||||
Ortholog (25) | ||||||
Paralog (46) | ||||||
Structured_description | Automated_description | Predicted to enable sodium channel activity. Predicted to be involved in sodium ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans unc-105. In C. elegans, unc-105 is involved in calcium ion transport; magnesium ion transport; and muscle organ development. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | PPA10323 | ||||
Corresponding_transcript | PPA10323.1 | |||||
Other_sequence | MH07095 | |||||
JI175583.1 | ||||||
JI170191.1 | ||||||
Oden_isotig26078 | ||||||
Dviv_isotig27200 | ||||||
Name_isotig03641 | ||||||
Oden_isotig19678 | ||||||
Experimental_info | Microarray_results | GPL14372_Probes_15747 | ||||
GPL14372_Probes_15748 | ||||||
GPL14372_Probes_15749 | ||||||
GPL14372_Probes_15750 | ||||||
Remark | [190208 pad] The CGC name Ppa-unc-105 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||
[210528 pad] The CGC name Ppa-unc-105 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
Method | Gene |