WormBase Tree Display for Gene: WBGene00093534

WBGene00093534 SMap: S_parent: Sequence: PPA_ChrIII
  Identity: Version: 3
    Name: CGC_name: Ppa-zmp-1 Inferred_automatically: from gene merge
      Sequence_name: PPA03980
      Molecular_name: PPA03980
        PPA03980.1
        PP64607
      Other_name: GENEPREDICTION_SNAP300000060400
        GENEPREDICTION_SNAP300000060401
        UMM-S412-0.44 Person_evidence: WBPerson606
      Public_name: Ppa-zmp-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:04 WBPerson4055 Event: Imported: from NGASP
        2 17 Nov 2017 15:19:42 WBPerson4055 Name_change: CGC_name: Ppa-zmp-1
        3 24 Nov 2017 09:46:48 WBPerson4055 Event: Acquires_merge: WBGene00093535
      Acquires_merge: WBGene00093535
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: zmp
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0.942943 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        2.82883 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00175085
      00175086
      00175087
      00175088
      00175089
    Ortholog (53)
    Paralog: WBGene00116008 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00205290 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00275788 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276521 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276525 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281787 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281867 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable metalloendopeptidase activity and zinc ion binding activity. Predicted to be involved in proteolysis. Predicted to be located in extracellular matrix. Is an ortholog of C. elegans zmp-1. In C. elegans, zmp-1 is involved in basement membrane disassembly. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA03980
    Corresponding_transcript: PPA03980.1
  Experimental_info: Microarray_results: GPL14372_Probes_27858
      GPL14372_Probes_27859
      GPL14372_Probes_83187
      GPL14372_Probes_83188
    Expression_cluster: WBPaper00061743:ppa-eud-1(tu1069)_regulated
  Method: Gene