WormBase Tree Display for Gene: WBGene00077722
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| WBGene00077722 | SMap | S_parent | Sequence | Y73B6A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | mir-58.2 | Paper_evidence | WBPaper00031661 | |||||
| Person_evidence | WBPerson18 | ||||||||
| Remark | miRBase v.20 | ||||||||
| Sequence_name | Y73B6A.7 | ||||||||
| Molecular_name | Y73B6A.7 | ||||||||
| Y73B6A.7a | |||||||||
| Y73B6A.7b | |||||||||
| Other_name | mir-1834 | ||||||||
| cel-mir-58b | Remark | miRBase V21 import | |||||||
| mir-58b | Remark | miRBase V21 import | |||||||
| CELE_Y73B6A.7 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | mir-58.2 | ||||||||
| DB_info | Database | miRBase | acc | MI0006776 | |||||
| NDB | locus_tag | CELE_Y73B6A.7 | |||||||
| NCBI | gene | 7040174 | |||||||
| RefSeq | protein | NR_024306.2 | |||||||
| RNAcentral | URSid | URS000017B5BB | |||||||
| URS0000273B97 | |||||||||
| URS0000366239 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 24 Apr 2008 10:13:57 | WBPerson1867 | Event | Created | |||
| 2 | 24 Apr 2008 10:45:50 | WBPerson2970 | Name_change | CGC_name | mir-1834 | ||||
| 3 | 27 Sep 2013 10:35:05 | WBPerson1983 | Event | Acquires_merge | WBGene00173479 | ||||
| Name_change | CGC_name | mir-58.2 | |||||||
| Other_name | mir-1834 | ||||||||
| Acquires_merge | WBGene00173479 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001265 | |||||||
| Gene_class | mir | ||||||||
| Allele | WBVar02151240 | ||||||||
| WBVar01499395 | |||||||||
| WBVar01499396 | |||||||||
| WBVar01499633 | |||||||||
| WBVar01500245 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Structured_description | Automated_description | Is affected by several genes including eat-2; prg-1; and alg-1 based on RNA-seq studies. Is affected by nicotine and graphene oxide based on quantitative PCR and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | Y73B6A.7 | |||||||
| Y73B6A.7a | |||||||||
| Y73B6A.7b | |||||||||
| Gene_product_binds | WBsf977969 | ||||||||
| WBsf977970 | |||||||||
| WBsf977971 | |||||||||
| WBsf977972 | |||||||||
| Experimental_info | Expression_cluster (17) | ||||||||
| Interaction | WBInteraction000525170 | ||||||||
| WBInteraction000542241 | |||||||||
| WBInteraction000542246 | |||||||||
| Map_info | Map | IV | Position | 3.21973 | |||||
| Positive | Positive_clone | Y73B6A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00035664 | ||||||||
| WBPaper00046439 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
