WormBase Tree Display for Gene: WBGene00072461

WBGene00072461 SMap: S_parent: Sequence: Crem_Contig229
  Identity: Version: 3
    Name: CGC_name: Cre-unc-63 From_analysis: Inferred_from_orthology
      Sequence_name: CRE20030
      Molecular_name: CRE20030
        CRE20030.1
        RP21969
      Other_name: cr01.sctg373.wum.4
      Public_name: Cre-unc-63
    Species: Caenorhabditis remanei
    History: Version_change (3)
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 1.82148 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        2.00006 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        2.17863 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 10.2856 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        10.606 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        13.1283 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        3.09653 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        9.19902 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        9.96525 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
      WBls:0000038 10.3712 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        2.67097 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        6.93241 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        7.75506 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
      WBls:0000041 0.953363 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        1.08614 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        1.33493 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        1.82367 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        1.85111 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        2.3673 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        2.46309 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        2.73718 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 (11)
      WBls:0000101 2.56703 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        3.70557 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00166291
      00166292
      00166293
      00166294
      00166295
      00166296
      00166297
      00166298
    Ortholog: WBGene00006797 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00042017 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00155461 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00151456 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00127771 Caenorhabditis japonica From_analysis: OMA
      WBGene00227537 Brugia malayi From_analysis: WormBase-Compara
      WBGene00228275 Brugia malayi From_analysis: WormBase-Compara
      WBGene00125622 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00241047 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00248763 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00100131 Pristionchus pacificus From_analysis: WormBase-Compara
      CBOVI.g9216 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g13047 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g9295 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13125 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g10660 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g8440 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15363 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g9534 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g16393 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g14259 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00461.g11125 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-63 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g19718 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01678.g22472 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_12399 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_000355 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g11705 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g11803 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10258700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g852 Caenorhabditis elegans From_analysis: WormBase-Compara
      chrI_pilon.g854 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00259988 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog (121)
    Structured_description: Automated_description: Predicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans unc-63. In C. elegans, unc-63 is involved in several processes, including calcium ion import across plasma membrane; cholinergic synaptic transmission; and regulation of multicellular organismal process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE20030
    Corresponding_transcript: CRE20030.1
    Other_sequence (44)
  Experimental_info: Expr_pattern: Expr1094119
    Microarray_results: GPL14146_CRE20030_1084-1143_0.913_15_C
      GPL14146_CRE20030_1325-1384_0.932_8_B
      GPL14146_CRE20030_1439-1498_0.954_1_A
  Method: Gene