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WormBase Tree Display for Gene: WBGene00072198

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Name Class

WBGene00072198SMapS_parentSequenceCrem_Contig300
IdentityVersion3
NameCGC_nameCre-ctg-1From_analysisInferred_from_orthology
Sequence_nameCRE13118
Molecular_nameCRE13118
CRE13118.1
RP06370
Other_namecr01.sctg321.wum.8
Public_nameCre-ctg-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:29WBPerson1847EventCreated
229 Nov 2007 17:00:42WBPerson2970Name_changeCGC_nameCre-ctg-1
303 Jul 2008 11:46:35WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE13118
Other_namecr01.sctg321.wum.8
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classctg
RNASeq_FPKMWBls:000000410.7259From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
9.17365From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
9.94977From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
WBls:0000024 (53)
WBls:000002713.4324From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
36.4135From_analysisRNASeq.remanei.WBls:0000027.control_mean
36.5664From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
40.229From_analysisRNASeq.remanei.WBls:0000027.control_median
43.8915From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
51.7637From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:000003842.6048From_analysisRNASeq.remanei.WBls:0000038.control_mean
55.6081From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
63.5653From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
8.64088From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:000004123.1497From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
25.539From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
26.15From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
29.1485From_analysisRNASeq.remanei.WBls:0000041.control_median
29.4955From_analysisRNASeq.remanei.WBls:0000041.control_mean
32.1469From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
33.8219From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
36.1655From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
WBls:0000063 (12)
WBls:000010115.4415From_analysisRNASeq.remanei.total_over_all_stages.control_median
23.8303From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (32)
Paralog (11)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: CRAL/TRIO, N-terminal domain superfamily; CRAL/TRIO domain; GOLD domain superfamily; CRAL-TRIO lipid binding domain; and CRAL-TRIO lipid binding domain superfamily. Is an ortholog of C. elegans ctg-1. In C. elegans, ctg-1 is involved in regulation of basement membrane organization.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE13118
Corresponding_transcriptCRE13118.1
Other_sequence (136)
Experimental_infoExpr_patternExpr1109247
Microarray_resultsGPL14146_CRE13118_1107-1166_0.842_42_B
GPL14146_CRE13118_839-898_0.943_2_C
GPL14146_CRE13118_989-1048_0.934_4_A
MethodGene