WormBase Tree Display for Gene: WBGene00071488

WBGene00071488 SMap: S_parent: Sequence: Crem_Contig109
  Identity: Version: 3
    Name: CGC_name: Cre-pie-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE19897
      Molecular_name: CRE19897
        CRE19897.1
        RP27086
      Other_name: cr01.sctg256.wum.6
      Public_name: Cre-pie-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:28 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:46 WBPerson2970 Name_change: CGC_name: Cre-pie-1
        3 03 Jul 2008 11:46:32 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE19897
                Other_name: cr01.sctg256.wum.6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pie
    RNASeq_FPKM: WBls:0000004 335.144 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        340.365 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        345.586 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (52)
      WBls:0000027 0.418798 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        0.826867 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        0.837596 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        2.46987 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 1.31303 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        2.25848 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        2.3106 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        3.36028 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 147.868 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        162.423 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        166.285 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        3.91514 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        3.92108 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        4.01874 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        75.9434 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        81.4052 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
      WBls:0000063 (12)
      WBls:0000101 3.96991 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        53.8358 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00165432
    Ortholog (26)
    Paralog: WBGene00053082 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00053640 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00054439 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00061597 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00062322 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00064784 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00077396 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable metal ion binding activity. Is an ortholog of C. elegans pie-1. In C. elegans, pie-1 is involved in several processes, including embryonic pattern specification; formation of primary germ layer; and negative regulation of nitrogen compound metabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE19897
    Corresponding_transcript: CRE19897.1
    Other_sequence: CR08927
      CBC08706_1
      CR08928
      CRC03076_1
  Experimental_info: Expr_pattern: Expr1109506
    Microarray_results: GPL14146_CRE19897_194-253_0.881_30_C
      GPL14146_CRE19897_595-654_0.834_64_A
      GPL14146_CRE19897_687-746_0.916_12_B
  Method: Gene