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WormBase Tree Display for Gene: WBGene00065365

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Name Class

WBGene00065365SMapS_parentSequenceCrem_Contig66
IdentityVersion3
NameCGC_nameCre-nhr-80From_analysisInferred_from_orthology
Sequence_nameCRE16168
Molecular_nameCRE16168
CRE16168.1
RP38258
Other_namecr01.sctg61.wum.27
Public_nameCre-nhr-80
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
229 Nov 2007 17:00:44WBPerson2970Name_changeCGC_nameCre-nhr-80
303 Jul 2008 11:46:04WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE16168
Other_namecr01.sctg61.wum.27
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000040.470327From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
0.68736From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
0.904393From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000270.227798From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
1.86968From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
2.14985From_analysisRNASeq.remanei.WBls:0000027.control_median
2.43002From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
2.52878From_analysisRNASeq.remanei.WBls:0000027.control_mean
5.58761From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:00000381.96064From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
3.24713From_analysisRNASeq.remanei.WBls:0000038.control_mean
3.8193From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
3.96144From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000412.72092From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
2.99324From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
4.24933From_analysisRNASeq.remanei.WBls:0000041.control_mean
4.45216From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
4.66505From_analysisRNASeq.remanei.WBls:0000041.control_median
4.87794From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
4.97482From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
5.47689From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
WBls:0000063 (12)
WBls:00001012.35777From_analysisRNASeq.remanei.total_over_all_stages.control_median
2.53978From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00160602
00160603
00160604
00160605
Ortholog (30)
Paralog (250)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-80. In C. elegans, nhr-80 is involved in determination of adult lifespan; positive regulation of metabolic process; and post-embryonic development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE16168
Corresponding_transcriptCRE16168.1
Other_sequence (16)
Experimental_infoExpr_patternExpr1109946
Microarray_resultsGPL14146_CRE16168_1064-1123_0.945_9_A
GPL14146_CRE16168_813-872_0.888_36_C
GPL14146_CRE16168_968-1027_0.865_49_B
MethodGene