WormBase Tree Display for Gene: WBGene00062733

WBGene00062733 SMap: S_parent: Sequence: Crem_Contig19
  Identity: Version: 3
    Name: CGC_name: Cre-unc-30 From_analysis: Inferred_from_orthology
      Sequence_name: CRE10293
      Molecular_name: CRE10293
        CRE10293.1
        RP38171
      Other_name: cr01.sctg33.wum.77
      Public_name: Cre-unc-30
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:47 WBPerson2970 Name_change: CGC_name: Cre-unc-30
        3 03 Jul 2008 11:45:47 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE10293
                Other_name: cr01.sctg33.wum.77
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 16.2151 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        18.361 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        20.507 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 0.192957 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        0.777628 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        1.3623 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        1.44935 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        4.24216 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 0.800287 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        1.00904 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        1.39182 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 12.2684 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        14.6422 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        1.52927 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        1.68864 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        1.72714 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        22.8097 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        26.5849 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        33.5137 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
      WBls:0000063 0.176018 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        0.404857 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        0.633696 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        1.08162 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        1.1136 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        1.34056 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
        2.07416 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        5.47821 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
      WBls:0000101 1.35143 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        5.52269 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00158217
      00158218
    Ortholog: WBGene00006766 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00025006 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00136008 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00222115 Brugia malayi From_analysis: WormBase-Compara
      WBGene00231184 Brugia malayi From_analysis: WormBase-Compara
      WBGene00241889 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g8957 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2906 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g15240 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13827 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g6959 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g2585 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g14409 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g8628 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP40.g2365 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_01031.g15429 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-30 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10922 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00041.g2203 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_19439 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014504 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g17942 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40144600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g12228 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00267688 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287313 Trichuris muris From_analysis: WormBase-Compara
      WBGene00298058 Trichuris muris From_analysis: WormBase-Compara
    Paralog (22)
    Structured_description: Automated_description: Predicted to enable DNA binding activity and DNA-binding transcription factor activity. Is an ortholog of C. elegans unc-30. In C. elegans, unc-30 is involved in neuron differentiation; positive regulation of transcription by RNA polymerase II; and regulation of locomotion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE10293
    Corresponding_transcript: CRE10293.1
    Other_sequence: CBC05195_1
      Acan_isotig10301
      JI173604.1
      Dviv_isotig23393
      CJC03266_1
      Oden_isotig21606
  Experimental_info: Expr_pattern: Expr1100394
    Microarray_results: GPL14146_CRE10293_537-596_0.792_81_B
      GPL14146_CRE10293_689-748_0.891_25_C
      GPL14146_CRE10293_884-943_0.885_29_A
  Method: Gene